Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.55□□□□□ -2.16
CCDC88CQ9P219 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC88CQ9P219 AC090616.3-201ENST00000582184 217 ntBASIC1.55□□□□□ -2.16
CCDC88CQ9P219 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC88CQ9P219 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.55□□□□□ -2.16
CCDC88CQ9P219 VN1R80P-201ENST00000597126 338 ntBASIC1.55□□□□□ -2.16
CCDC88CQ9P219 AC069545.1-201ENST00000605671 358 ntBASIC1.55□□□□□ -2.16
CCDC88CQ9P219 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.55□□□□□ -2.16
CCDC88CQ9P219 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CCDC88CQ9P219 AC009090.3-201ENST00000616553 565 ntBASIC1.55□□□□□ -2.16
CCDC88CQ9P219 AC116618.1-201ENST00000634617 774 ntBASIC1.55□□□□□ -2.16
CCDC88CQ9P219 AC087821.2-201ENST00000637086 450 ntBASIC1.55□□□□□ -2.16
CCDC88CQ9P219 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.55□□□□□ -2.16
CCDC88CQ9P219 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 OR1L1-202ENST00000373686 1083 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 TXNP7-201ENST00000406296 293 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 PTGES3P2-201ENST00000407942 482 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 BMI1P1-201ENST00000445879 941 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AL360221.1-201ENST00000445989 335 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 USP9YP34-201ENST00000453983 808 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 Y_RNA.673-201ENST00000516306 88 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AC068135.2-201ENST00000569293 1028 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AC022662.1-201ENST00000580252 331 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AC090330.1-201ENST00000588646 764 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AC012360.2-201ENST00000609349 391 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AC005332.10-201ENST00000612725 619 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AL589994.2-201ENST00000621124 579 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AC040168.1-201ENST00000623594 991 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 RNU6-14P-201ENST00000384630 106 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AL356379.1-201ENST00000414105 126 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 SFR1P2-201ENST00000421841 730 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 RPL31P63-201ENST00000422565 375 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 TAAR7P-201ENST00000436141 242 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AC092393.1-201ENST00000439625 742 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AL158053.1-201ENST00000441503 453 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AC118282.2-201ENST00000508739 374 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AC114786.4-201ENST00000508771 728 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AC114797.1-201ENST00000514003 728 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 Y_RNA.675-201ENST00000516389 149 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 HSPA8P13-201ENST00000523715 472 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AC138915.2-201ENST00000569776 97 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.54□□□□□ -2.16
CCDC88CQ9P219 RN7SL622P-201ENST00000585292 275 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AC021749.1-201ENST00000604322 607 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AP000238.1-201ENST00000608759 426 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AC025594.3-201ENST00000613068 790 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 DUXAP9-208ENST00000622815 614 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 AL157770.1-201ENST00000623049 439 ntBASIC1.54□□□□□ -2.16
CCDC88CQ9P219 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CCDC88CQ9P219 RNU6-582P-201ENST00000362989 107 ntBASIC1.53□□□□□ -2.16
CCDC88CQ9P219 RNU6-115P-201ENST00000364310 107 ntBASIC1.53□□□□□ -2.16
CCDC88CQ9P219 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC88CQ9P219 BTF3P4-201ENST00000418852 495 ntBASIC1.53□□□□□ -2.16
CCDC88CQ9P219 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC88CQ9P219 XKRYP1-201ENST00000423438 492 ntBASIC1.53□□□□□ -2.16
CCDC88CQ9P219 XKRYP2-201ENST00000432915 492 ntBASIC1.53□□□□□ -2.16
CCDC88CQ9P219 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC88CQ9P219 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.53□□□□□ -2.16
CCDC88CQ9P219 AC022447.1-201ENST00000515358 464 ntBASIC1.53□□□□□ -2.16
CCDC88CQ9P219 RNU6-1256P-201ENST00000516539 103 ntBASIC1.53□□□□□ -2.16
CCDC88CQ9P219 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC88CQ9P219 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.53□□□□□ -2.16
CCDC88CQ9P219 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC88CQ9P219 AC124947.2-202ENST00000552735 133 ntBASIC1.53□□□□□ -2.16
CCDC88CQ9P219 AL136520.1-202ENST00000555494 763 ntBASIC1.53□□□□□ -2.16
CCDC88CQ9P219 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC88CQ9P219 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC88CQ9P219 MIR4498-201ENST00000577599 66 ntBASIC1.53□□□□□ -2.16
CCDC88CQ9P219 MIR3683-201ENST00000580847 82 ntBASIC1.53□□□□□ -2.16
CCDC88CQ9P219 BNIP3P8-201ENST00000597863 560 ntBASIC1.53□□□□□ -2.16
CCDC88CQ9P219 MTND4LP5-201ENST00000605152 292 ntBASIC1.53□□□□□ -2.16
CCDC88CQ9P219 AL583856.2-201ENST00000606298 543 ntBASIC1.53□□□□□ -2.16
CCDC88CQ9P219 MIR6130-201ENST00000619419 109 ntBASIC1.53□□□□□ -2.16
CCDC88CQ9P219 OR4G11P-202ENST00000642116 1414 ntBASIC1.53□□□□□ -2.17
CCDC88CQ9P219 AL049641.1-201ENST00000441055 1948 ntBASIC1.53□□□□□ -2.17
CCDC88CQ9P219 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.17
CCDC88CQ9P219 ZNF876P-202ENST00000398732 1485 ntBASIC1.52□□□□□ -2.17
CCDC88CQ9P219 Y_RNA.25-201ENST00000362528 102 ntBASIC1.52□□□□□ -2.17
CCDC88CQ9P219 RNU6-354P-201ENST00000383862 107 ntBASIC1.52□□□□□ -2.17
CCDC88CQ9P219 RNU6-217P-201ENST00000384164 104 ntBASIC1.52□□□□□ -2.17
CCDC88CQ9P219 RNU6-610P-201ENST00000384264 107 ntBASIC1.52□□□□□ -2.17
CCDC88CQ9P219 AL356131.1-201ENST00000405826 414 ntBASIC1.52□□□□□ -2.17
CCDC88CQ9P219 RPS7P9-201ENST00000414704 586 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms