Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 DSTNP4-201ENST00000399472 474 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 MTCO3P12-201ENST00000416718 547 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AIMP1P2-201ENST00000425294 312 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AC068135.1-201ENST00000446164 246 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 OR6K5P-201ENST00000447050 945 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AL139109.1-201ENST00000455491 297 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AC015908.1-201ENST00000478739 476 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AC114322.1-201ENST00000506771 926 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AC087272.1-201ENST00000523624 533 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 COX6CP3-201ENST00000580869 223 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AC242628.1-201ENST00000606810 391 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AC245884.12-201ENST00000615364 59 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AC083865.1-201ENST00000636634 831 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 ZNF519P1-201ENST00000449011 1626 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 RNA5SP258-201ENST00000362750 119 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 MIR7-1-201ENST00000384871 110 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 MIR1285-1-201ENST00000408593 84 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 RPS15AP38-201ENST00000413110 372 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 SNRPEP10-201ENST00000420249 274 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 TMEM167AP1-201ENST00000423409 219 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AC093770.1-201ENST00000511559 571 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 OR8K4P-201ENST00000534608 872 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 AC021851.1-201ENST00000608537 1082 ntBASIC1.48□□□□□ -2.17
PHRF1Q9P1Y6 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 Y_RNA.178-201ENST00000363832 102 ntBASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 SNORA46.1-201ENST00000391069 153 ntBASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 RPS20P24-201ENST00000457473 361 ntBASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 NAP1L1P3-201ENST00000462291 880 ntBASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 ICE2P2-201ENST00000483823 2787 ntBASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 MTND3P24-201ENST00000506306 329 ntBASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 OR5BM1P-201ENST00000512021 366 ntBASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 RNA5SP384-201ENST00000516615 116 ntBASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 AP005597.4-201ENST00000526762 229 ntBASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 AC004775.1-201ENST00000607389 753 ntBASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 AL162373.1-201ENST00000620433 407 ntBASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 AC017104.5-201ENST00000637647 639 ntBASIC1.47□□□□□ -2.17
PHRF1Q9P1Y6 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 MTND5P31-201ENST00000419366 1374 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 RNU6-730P-201ENST00000383954 104 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 RNU6-152P-201ENST00000384037 107 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 RNU6-1151P-201ENST00000384684 107 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 TXNP7-201ENST00000406296 293 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 AL512504.1-201ENST00000415494 778 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 LINC01347-201ENST00000417964 355 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 UBE2V1P6-201ENST00000430840 422 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 RNA5SP310-201ENST00000459084 116 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 RNA5SP233-201ENST00000459153 113 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 RNU6-1132P-201ENST00000459214 107 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 RNA5SP471-201ENST00000516971 106 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 AC092474.3-201ENST00000603022 568 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 NUTF2P8-201ENST00000604593 363 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 AC079791.1-201ENST00000605356 973 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 AC108706.1-201ENST00000611053 297 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 AC243773.3-201ENST00000613270 256 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 AC009032.1-201ENST00000617574 431 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 AC110079.1-202ENST00000635213 138 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 AL513185.3-201ENST00000433335 1300 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 AC111188.2-201ENST00000529697 1387 ntBASIC1.46□□□□□ -2.18
PHRF1Q9P1Y6 RNU4-38P-201ENST00000364472 129 ntBASIC1.45□□□□□ -2.18
PHRF1Q9P1Y6 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.45□□□□□ -2.18
PHRF1Q9P1Y6 AL445305.1-201ENST00000432577 575 ntBASIC1.45□□□□□ -2.18
PHRF1Q9P1Y6 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.45□□□□□ -2.18
PHRF1Q9P1Y6 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC1.45□□□□□ -2.18
PHRF1Q9P1Y6 RPL30P14-201ENST00000482744 348 ntBASIC1.45□□□□□ -2.18
PHRF1Q9P1Y6 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.45□□□□□ -2.18
PHRF1Q9P1Y6 PRELID3BP4-201ENST00000515476 571 ntBASIC1.45□□□□□ -2.18
PHRF1Q9P1Y6 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.45□□□□□ -2.18
PHRF1Q9P1Y6 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.45□□□□□ -2.18
PHRF1Q9P1Y6 AC022387.2-201ENST00000604050 448 ntBASIC1.45□□□□□ -2.18
PHRF1Q9P1Y6 AP001330.4-201ENST00000604350 154 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms