Protein–RNA interactions for Protein: Q9P0V3

SH3BP4, SH3 domain-binding protein 4, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4Q9P0V3 BRDTP1-201ENST00000605735 677 ntBASIC3.69□□□□□ -1.82
SH3BP4Q9P0V3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SH3BP4Q9P0V3 uc_338.34-201ENST00000617467 174 ntBASIC3.69□□□□□ -1.82
SH3BP4Q9P0V3 MIR6130-201ENST00000619419 109 ntBASIC3.69□□□□□ -1.82
SH3BP4Q9P0V3 AC112484.5-201ENST00000624189 228 ntBASIC3.69□□□□□ -1.82
SH3BP4Q9P0V3 OR52H1-202ENST00000641796 1061 ntBASIC3.69□□□□□ -1.82
SH3BP4Q9P0V3 AL672296.1-201ENST00000427780 2158 ntBASIC3.69□□□□□ -1.82
SH3BP4Q9P0V3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SH3BP4Q9P0V3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.69□□□□□ -1.82
SH3BP4Q9P0V3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 AC121333.1-201ENST00000567488 2709 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 RNU6-173P-201ENST00000364215 104 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 Y_RNA.387-201ENST00000383918 102 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 SNORD116-29-201ENST00000384516 83 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 RNU4-14P-201ENST00000410858 122 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 RPL21P24-201ENST00000413752 448 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 UBE2FP1-201ENST00000416536 447 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 USP9YP20-201ENST00000419224 558 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 RPL7P46-201ENST00000425129 740 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 RPS3AP52-201ENST00000435639 297 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 MTCO3P45-201ENST00000443036 613 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 RPL21P93-201ENST00000480465 489 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 AC083904.1-201ENST00000487828 231 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 AC096576.1-201ENST00000489014 359 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 KLHL2P1-201ENST00000508691 521 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 RNU6-1088P-201ENST00000516850 104 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 AC087369.1-201ENST00000520775 996 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 AL137161.1-201ENST00000532231 390 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 AC025884.1-201ENST00000556034 378 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 AL121576.1-201ENST00000556055 276 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 AL022345.1-201ENST00000607292 135 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 MIR6867-201ENST00000610636 67 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 MIR6716-201ENST00000613413 80 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 AL355810.1-201ENST00000614629 552 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 SNHG22-203ENST00000617833 660 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 AL357559.1-201ENST00000622228 274 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 MIR6830-201ENST00000636015 70 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 MTCO1P9-201ENST00000505577 1534 ntBASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
SH3BP4Q9P0V3 API5P2-201ENST00000397055 1498 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 Y_RNA.162-201ENST00000363683 102 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 RNA5SP97-201ENST00000365006 84 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 SNORD42.2-201ENST00000365570 69 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 RNU6-550P-201ENST00000391057 101 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 AL022722.2-201ENST00000402519 180 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 AL592114.1-201ENST00000403842 483 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 AL590004.1-201ENST00000405321 300 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 RPL21P65-201ENST00000406094 466 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 AL356095.1-201ENST00000417217 199 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 NDUFA5P4-201ENST00000436704 385 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 AC008481.1-201ENST00000463278 396 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 Y_RNA.654-201ENST00000497848 106 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 TRMT10BP1-201ENST00000519377 943 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 MTND4P7-201ENST00000523876 130 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 YPEL5P3-201ENST00000547227 352 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 AC090877.1-201ENST00000561418 344 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 AC093249.1-201ENST00000567049 203 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 AC008521.1-201ENST00000587471 187 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 AC103710.2-202ENST00000641454 2853 ntBASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
SH3BP4Q9P0V3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.66□□□□□ -1.82
SH3BP4Q9P0V3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
SH3BP4Q9P0V3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.66□□□□□ -1.82
SH3BP4Q9P0V3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SH3BP4Q9P0V3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.66□□□□□ -1.82
SH3BP4Q9P0V3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.66□□□□□ -1.82
SH3BP4Q9P0V3 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SH3BP4Q9P0V3 RNA5SP443-201ENST00000363083 132 ntBASIC3.66□□□□□ -1.82
SH3BP4Q9P0V3 RNU6-946P-201ENST00000383878 107 ntBASIC3.66□□□□□ -1.82
SH3BP4Q9P0V3 SNORA56-201ENST00000383966 129 ntBASIC3.66□□□□□ -1.82
SH3BP4Q9P0V3 RNA5SP129-201ENST00000410276 118 ntBASIC3.66□□□□□ -1.82
SH3BP4Q9P0V3 AC068533.1-201ENST00000418542 415 ntBASIC3.66□□□□□ -1.82
SH3BP4Q9P0V3 ARL5AP1-201ENST00000418991 388 ntBASIC3.66□□□□□ -1.82
SH3BP4Q9P0V3 AL353729.1-201ENST00000425044 720 ntBASIC3.66□□□□□ -1.82
SH3BP4Q9P0V3 AC004866.2-201ENST00000438285 481 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms