Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 LTV1P1-201ENST00000510683 1237 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AC025755.1-201ENST00000521306 278 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 MTCO2P15-201ENST00000532655 656 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AL132657.2-201ENST00000564417 358 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AL391813.1-201ENST00000603098 260 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AC009314.1-201ENST00000603871 304 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AC007938.3-201ENST00000604965 623 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AP002802.2-201ENST00000605877 235 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AC084824.5-201ENST00000612009 413 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AC098657.3-201ENST00000620434 263 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AC007998.5-201ENST00000622938 237 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 AC025048.6-202ENST00000627667 438 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 MIR7157-201ENST00000635801 60 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
VAPAQ9P0L0 ZNF658B-202ENST00000615961 3375 ntBASIC1.97□□□□□ -2.09
VAPAQ9P0L0 CENPCP1-201ENST00000533085 2578 ntBASIC1.96□□□□□ -2.1
VAPAQ9P0L0 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VAPAQ9P0L0 Y_RNA.245-201ENST00000364493 95 ntBASIC1.96□□□□□ -2.1
VAPAQ9P0L0 AL445529.1-201ENST00000398713 389 ntBASIC1.96□□□□□ -2.1
VAPAQ9P0L0 CCNG1P1-201ENST00000406783 885 ntBASIC1.96□□□□□ -2.1
VAPAQ9P0L0 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.96□□□□□ -2.1
VAPAQ9P0L0 MICF-203ENST00000432679 129 ntBASIC1.96□□□□□ -2.1
VAPAQ9P0L0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.96□□□□□ -2.1
VAPAQ9P0L0 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.96□□□□□ -2.1
VAPAQ9P0L0 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.96□□□□□ -2.1
VAPAQ9P0L0 HIGD1AP2-201ENST00000446367 280 ntBASIC1.96□□□□□ -2.1
VAPAQ9P0L0 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.96□□□□□ -2.1
VAPAQ9P0L0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.96□□□□□ -2.1
VAPAQ9P0L0 CECR9-201ENST00000453421 199 ntBASIC1.96□□□□□ -2.1
VAPAQ9P0L0 TRBV1-201ENST00000476502 284 ntBASIC1.96□□□□□ -2.1
VAPAQ9P0L0 RPS15AP36-201ENST00000492022 382 ntBASIC1.96□□□□□ -2.1
VAPAQ9P0L0 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
VAPAQ9P0L0 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.96□□□□□ -2.1
VAPAQ9P0L0 AC118465.1-201ENST00000513820 1271 ntBASIC1.96□□□□□ -2.1
VAPAQ9P0L0 RNU6-390P-201ENST00000516259 103 ntBASIC1.96□□□□□ -2.1
VAPAQ9P0L0 RNU7-193P-201ENST00000516723 65 ntBASIC1.96□□□□□ -2.1
VAPAQ9P0L0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.96□□□□□ -2.1
VAPAQ9P0L0 AP003122.3-201ENST00000526316 255 ntBASIC1.96□□□□□ -2.1
VAPAQ9P0L0 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.96□□□□□ -2.1
VAPAQ9P0L0 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.96□□□□□ -2.1
VAPAQ9P0L0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.96□□□□□ -2.1
VAPAQ9P0L0 MIR4448-201ENST00000584360 86 ntBASIC1.96□□□□□ -2.1
VAPAQ9P0L0 AC005261.5-201ENST00000596280 355 ntBASIC1.96□□□□□ -2.1
VAPAQ9P0L0 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.96□□□□□ -2.1
VAPAQ9P0L0 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.96□□□□□ -2.1
VAPAQ9P0L0 AC124016.2-201ENST00000610058 665 ntBASIC1.96□□□□□ -2.1
VAPAQ9P0L0 AC010678.1-201ENST00000614118 713 ntBASIC1.96□□□□□ -2.1
VAPAQ9P0L0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.96□□□□□ -2.1
VAPAQ9P0L0 AC104985.3-201ENST00000623479 597 ntBASIC1.96□□□□□ -2.1
VAPAQ9P0L0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
VAPAQ9P0L0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.95□□□□□ -2.1
VAPAQ9P0L0 HSPE1P11-201ENST00000339579 310 ntBASIC1.95□□□□□ -2.1
VAPAQ9P0L0 OR56A5-201ENST00000340110 738 ntBASIC1.95□□□□□ -2.1
VAPAQ9P0L0 RNU1-73P-201ENST00000383971 164 ntBASIC1.95□□□□□ -2.1
VAPAQ9P0L0 AL590084.1-201ENST00000407885 387 ntBASIC1.95□□□□□ -2.1
VAPAQ9P0L0 RNU2-40P-201ENST00000410833 196 ntBASIC1.95□□□□□ -2.1
VAPAQ9P0L0 Z92545.1-201ENST00000411782 234 ntBASIC1.95□□□□□ -2.1
VAPAQ9P0L0 MTND1P21-201ENST00000412991 285 ntBASIC1.95□□□□□ -2.1
VAPAQ9P0L0 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.95□□□□□ -2.1
VAPAQ9P0L0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.95□□□□□ -2.1
VAPAQ9P0L0 RPL35AP22-201ENST00000436855 335 ntBASIC1.95□□□□□ -2.1
VAPAQ9P0L0 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.95□□□□□ -2.1
VAPAQ9P0L0 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.95□□□□□ -2.1
VAPAQ9P0L0 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.95□□□□□ -2.1
VAPAQ9P0L0 AC068781.1-201ENST00000488231 618 ntBASIC1.95□□□□□ -2.1
VAPAQ9P0L0 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VAPAQ9P0L0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.95□□□□□ -2.1
VAPAQ9P0L0 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.95□□□□□ -2.1
VAPAQ9P0L0 NACAP3-201ENST00000552100 481 ntBASIC1.95□□□□□ -2.1
VAPAQ9P0L0 SNRPGP18-201ENST00000553000 214 ntBASIC1.95□□□□□ -2.1
VAPAQ9P0L0 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.95□□□□□ -2.1
VAPAQ9P0L0 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.95□□□□□ -2.1
VAPAQ9P0L0 AL512347.1-201ENST00000566420 503 ntBASIC1.95□□□□□ -2.1
VAPAQ9P0L0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.95□□□□□ -2.1
VAPAQ9P0L0 AC026790.2-201ENST00000606282 430 ntBASIC1.95□□□□□ -2.1
VAPAQ9P0L0 AC107075.1-201ENST00000613695 314 ntBASIC1.95□□□□□ -2.1
VAPAQ9P0L0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
VAPAQ9P0L0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.95□□□□□ -2.1
VAPAQ9P0L0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AL136360.1-201ENST00000503377 1900 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 FAM133CP-201ENST00000332869 704 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 RNU6-778P-201ENST00000363269 103 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 SNORA46.1-201ENST00000391069 153 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.94□□□□□ -2.1
VAPAQ9P0L0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.94□□□□□ -2.1
VAPAQ9P0L0 TIMM9P2-201ENST00000419324 266 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 ELOCP14-201ENST00000428070 331 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 RPL30P4-201ENST00000429309 333 ntBASIC1.94□□□□□ -2.1
VAPAQ9P0L0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VAPAQ9P0L0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms