Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 NANOGNBP1-201ENST00000448444 480 ntBASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 FABP5P15-201ENST00000453566 214 ntBASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 RPL23AP41-201ENST00000484754 458 ntBASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 AC112673.1-201ENST00000513168 575 ntBASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 SCARNA17.1-201ENST00000516211 143 ntBASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 SCARNA17.2-201ENST00000516334 143 ntBASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 RNA5SP165-201ENST00000517142 115 ntBASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 SUB1P1-201ENST00000524415 382 ntBASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 MIR3146-201ENST00000580367 79 ntBASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 AC012468.1-201ENST00000604888 430 ntBASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 AL161734.1-201ENST00000609720 557 ntBASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 SCARNA17.4-201ENST00000614296 143 ntBASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 AC009159.1-201ENST00000618386 642 ntBASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 AC010297.1-201ENST00000623948 149 ntBASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
KCNIP1Q9NZI2 ELF2P3-201ENST00000445099 1506 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 MTND5P29-201ENST00000458676 1807 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 UBE2L2-201ENST00000254302 429 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 RNU6-500P-201ENST00000362349 107 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 RNA5SP393-201ENST00000363423 117 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 RNU6-512P-201ENST00000364438 103 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 SNORA68.1-201ENST00000364537 132 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 RNU1-100P-201ENST00000365255 165 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 RNU6-809P-201ENST00000384461 107 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 MIR627-201ENST00000384979 97 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 RNA5SP21-201ENST00000410917 96 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 HIGD1AP15-201ENST00000416198 280 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 ZNF90P2-204ENST00000419323 1075 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 RPS27AP14-201ENST00000422868 454 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AL358075.3-201ENST00000426289 226 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 ISCA1P1-201ENST00000426679 387 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AC112220.1-201ENST00000434628 355 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AL008629.1-201ENST00000438615 184 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AC093156.1-201ENST00000440382 670 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 DPPA3P1-201ENST00000448050 469 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AC108059.3-201ENST00000456388 214 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 RPS29P26-201ENST00000477483 171 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AC090525.1-201ENST00000479116 478 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AC116347.2-201ENST00000514912 523 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AC107934.1-201ENST00000522215 217 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 EEF1A1P37-201ENST00000522748 715 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AC060766.3-201ENST00000591442 263 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AC022022.2-201ENST00000602989 360 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AL355877.2-201ENST00000603670 358 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AP000860.1-201ENST00000605250 559 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AC103710.1-201ENST00000610003 901 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AC104010.1-201ENST00000616889 150 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AL356266.1-201ENST00000623311 483 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 AC104454.1-201ENST00000421341 1401 ntBASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.22□□□□□ -2.05
KCNIP1Q9NZI2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
KCNIP1Q9NZI2 RNY3P13-201ENST00000365542 102 ntBASIC2.21□□□□□ -2.06
KCNIP1Q9NZI2 RNU6-701P-201ENST00000384059 107 ntBASIC2.21□□□□□ -2.06
KCNIP1Q9NZI2 RNU6-278P-201ENST00000390945 109 ntBASIC2.21□□□□□ -2.06
KCNIP1Q9NZI2 RNA5SP210-201ENST00000391034 120 ntBASIC2.21□□□□□ -2.06
KCNIP1Q9NZI2 RPL17P12-201ENST00000413391 526 ntBASIC2.21□□□□□ -2.06
KCNIP1Q9NZI2 AL353777.1-201ENST00000425552 326 ntBASIC2.21□□□□□ -2.06
KCNIP1Q9NZI2 AL139132.1-201ENST00000431587 344 ntBASIC2.21□□□□□ -2.06
KCNIP1Q9NZI2 RPL37P21-201ENST00000435890 276 ntBASIC2.21□□□□□ -2.06
KCNIP1Q9NZI2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.21□□□□□ -2.06
KCNIP1Q9NZI2 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.21□□□□□ -2.06
KCNIP1Q9NZI2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.21□□□□□ -2.06
KCNIP1Q9NZI2 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.21□□□□□ -2.06
KCNIP1Q9NZI2 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
KCNIP1Q9NZI2 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.21□□□□□ -2.06
KCNIP1Q9NZI2 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
KCNIP1Q9NZI2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms