Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 U2.21-201ENST00000637295 81 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 AC010149.2-201ENST00000637608 315 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.35□□□□□ -2.03
KLHL28Q9NXS3 AC080128.1-201ENST00000474389 1917 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 RNA5SP68-201ENST00000363885 119 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 Y_RNA.245-201ENST00000364493 95 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 U3.12-201ENST00000364498 214 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 MIR122-201ENST00000385044 85 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AL139039.1-201ENST00000401900 692 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AL162578.1-201ENST00000406202 378 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 MIR320C1-201ENST00000408566 88 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 NDUFS5P4-201ENST00000412983 318 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AC083875.1-201ENST00000419509 405 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 ELOCP14-201ENST00000428070 331 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AL035407.1-201ENST00000429211 571 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 MED14P1-201ENST00000430517 648 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 ELOCP7-201ENST00000439968 331 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 IFNA11P-201ENST00000446352 526 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 ANKRD26P4-201ENST00000455755 950 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AC023141.11-201ENST00000508864 202 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 RNU6-390P-201ENST00000516259 103 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AL133153.1-201ENST00000557756 303 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 MTCYBP23-201ENST00000558717 1102 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AGGF1P5-201ENST00000567900 919 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 RPS3AP23-202ENST00000574601 686 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AP000403.1-201ENST00000603349 851 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AC004805.2-201ENST00000605382 482 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AL121652.1-201ENST00000608851 448 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AC011890.2-201ENST00000613393 294 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AC243829.7-201ENST00000633081 225 ntBASIC2.34□□□□□ -2.03
KLHL28Q9NXS3 AC010329.5-201ENST00000623497 2174 ntBASIC2.34□□□□□ -2.04
KLHL28Q9NXS3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
KLHL28Q9NXS3 AC110491.1-201ENST00000562191 2010 ntBASIC2.34□□□□□ -2.04
KLHL28Q9NXS3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 RNU6-462P-201ENST00000362659 105 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 RN7SKP266-201ENST00000410232 287 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 RNU4-72P-201ENST00000410754 173 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 MTCO2P17-201ENST00000424336 677 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 SKA2P1-201ENST00000425592 390 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 HMGB1P9-201ENST00000429856 646 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AC010153.1-201ENST00000432862 727 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 MTND1P28-201ENST00000435623 950 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 RSU1P2-202ENST00000437884 485 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AC098831.1-201ENST00000440661 216 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 FCF1P6-201ENST00000456841 595 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 snoU109.3-201ENST00000459477 145 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AC010631.1-201ENST00000474150 156 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AC093809.1-201ENST00000509155 340 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AC010587.2-201ENST00000511727 448 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 RNA5SP148-201ENST00000516527 94 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 RNA5SP82-201ENST00000516707 92 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AC243972.3-201ENST00000539655 198 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 MIR5694-201ENST00000581190 76 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AC021171.1-201ENST00000603137 706 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AC007349.4-201ENST00000608114 532 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AL589743.7-201ENST00000612637 233 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AC025594.3-201ENST00000613068 790 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AC245884.12-201ENST00000615364 59 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 U4.3-201ENST00000621047 82 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 MTND5P29-201ENST00000458676 1807 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 AC004520.1-201ENST00000608362 1413 ntBASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.33□□□□□ -2.04
KLHL28Q9NXS3 ELF2P3-201ENST00000445099 1506 ntBASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 AC010889.1-201ENST00000566193 2666 ntBASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 RNU6-778P-201ENST00000363269 103 ntBASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 MIR620-201ENST00000385232 95 ntBASIC2.32□□□□□ -2.04
KLHL28Q9NXS3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms