Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 AL589743.7-201ENST00000612637 233 ntBASIC2.08□□□□□ -2.08
CLN6Q9NWW5 AC005332.10-201ENST00000612725 619 ntBASIC2.08□□□□□ -2.08
CLN6Q9NWW5 MIR6766-201ENST00000622641 72 ntBASIC2.08□□□□□ -2.08
CLN6Q9NWW5 AL049777.1-201ENST00000622740 518 ntBASIC2.08□□□□□ -2.08
CLN6Q9NWW5 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CLN6Q9NWW5 AL160394.1-201ENST00000624765 724 ntBASIC2.08□□□□□ -2.08
CLN6Q9NWW5 AP000720.1-201ENST00000625091 483 ntBASIC2.08□□□□□ -2.08
CLN6Q9NWW5 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLN6Q9NWW5 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.07□□□□□ -2.08
CLN6Q9NWW5 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.07□□□□□ -2.08
CLN6Q9NWW5 RNU2-68P-201ENST00000410878 191 ntBASIC2.07□□□□□ -2.08
CLN6Q9NWW5 RPL26P27-201ENST00000414397 437 ntBASIC2.07□□□□□ -2.08
CLN6Q9NWW5 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CLN6Q9NWW5 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CLN6Q9NWW5 MTATP6P30-201ENST00000443540 664 ntBASIC2.07□□□□□ -2.08
CLN6Q9NWW5 EEF1B2P7-201ENST00000451177 676 ntBASIC2.07□□□□□ -2.08
CLN6Q9NWW5 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.07□□□□□ -2.08
CLN6Q9NWW5 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CLN6Q9NWW5 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.07□□□□□ -2.08
CLN6Q9NWW5 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.07□□□□□ -2.08
CLN6Q9NWW5 AC093281.2-201ENST00000510153 597 ntBASIC2.07□□□□□ -2.08
CLN6Q9NWW5 LTV1P1-201ENST00000510683 1237 ntBASIC2.07□□□□□ -2.08
CLN6Q9NWW5 RNU1-103P-201ENST00000516502 125 ntBASIC2.07□□□□□ -2.08
CLN6Q9NWW5 RNA5SP82-201ENST00000516707 92 ntBASIC2.07□□□□□ -2.08
CLN6Q9NWW5 AC021269.2-201ENST00000532318 330 ntBASIC2.07□□□□□ -2.08
CLN6Q9NWW5 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.07□□□□□ -2.08
CLN6Q9NWW5 AGGF1P5-201ENST00000567900 919 ntBASIC2.07□□□□□ -2.08
CLN6Q9NWW5 AC009127.3-201ENST00000570531 403 ntBASIC2.07□□□□□ -2.08
CLN6Q9NWW5 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.07□□□□□ -2.08
CLN6Q9NWW5 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
CLN6Q9NWW5 AC103810.6-201ENST00000606708 136 ntBASIC2.07□□□□□ -2.08
CLN6Q9NWW5 OR2AS2P-201ENST00000606902 342 ntBASIC2.07□□□□□ -2.08
CLN6Q9NWW5 AL121652.1-201ENST00000608851 448 ntBASIC2.07□□□□□ -2.08
CLN6Q9NWW5 AP002371.2-201ENST00000624450 503 ntBASIC2.07□□□□□ -2.08
CLN6Q9NWW5 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.07□□□□□ -2.08
CLN6Q9NWW5 AC097655.1-201ENST00000635075 318 ntBASIC2.07□□□□□ -2.08
CLN6Q9NWW5 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.07□□□□□ -2.08
CLN6Q9NWW5 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.07□□□□□ -2.08
CLN6Q9NWW5 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CLN6Q9NWW5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLN6Q9NWW5 RNU6-462P-201ENST00000362659 105 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 RNU6-778P-201ENST00000363269 103 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 RNU6-920P-201ENST00000410926 92 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 AL359704.1-201ENST00000411586 781 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.06□□□□□ -2.08
CLN6Q9NWW5 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 MICF-203ENST00000432679 129 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.06□□□□□ -2.08
CLN6Q9NWW5 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.06□□□□□ -2.08
CLN6Q9NWW5 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.06□□□□□ -2.08
CLN6Q9NWW5 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.06□□□□□ -2.08
CLN6Q9NWW5 RNU7-59P-201ENST00000459101 61 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 AC128713.1-201ENST00000471495 306 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
CLN6Q9NWW5 AC004263.1-201ENST00000479327 332 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 GTF2IP9-201ENST00000502460 301 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 SNORA31.6-201ENST00000516241 130 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 RNA5SP24-201ENST00000516478 95 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.06□□□□□ -2.08
CLN6Q9NWW5 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.06□□□□□ -2.08
CLN6Q9NWW5 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.06□□□□□ -2.08
CLN6Q9NWW5 AL391813.1-201ENST00000603098 260 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 AC025588.2-201ENST00000604851 466 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 AC007038.2-201ENST00000608095 740 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.06□□□□□ -2.08
CLN6Q9NWW5 AC006386.1-201ENST00000619436 415 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.06□□□□□ -2.08
CLN6Q9NWW5 MIR7157-201ENST00000635801 60 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 U2.21-201ENST00000637295 81 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLN6Q9NWW5 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLN6Q9NWW5 ADAM3A-203ENST00000461344 2157 ntBASIC2.06□□□□□ -2.08
CLN6Q9NWW5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CLN6Q9NWW5 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLN6Q9NWW5 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CLN6Q9NWW5 RNU6-301P-201ENST00000384277 107 ntBASIC2.05□□□□□ -2.08
CLN6Q9NWW5 MIR128-1-201ENST00000384921 82 ntBASIC2.05□□□□□ -2.08
CLN6Q9NWW5 MIR218-1-201ENST00000384999 110 ntBASIC2.05□□□□□ -2.08
CLN6Q9NWW5 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.05□□□□□ -2.08
CLN6Q9NWW5 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.05□□□□□ -2.08
CLN6Q9NWW5 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.05□□□□□ -2.08
CLN6Q9NWW5 RSU1P2-202ENST00000437884 485 ntBASIC2.05□□□□□ -2.08
CLN6Q9NWW5 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.05□□□□□ -2.08
CLN6Q9NWW5 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.05□□□□□ -2.08
CLN6Q9NWW5 TRBV1-201ENST00000476502 284 ntBASIC2.05□□□□□ -2.08
CLN6Q9NWW5 AC097462.2-201ENST00000504623 481 ntBASIC2.05□□□□□ -2.08
CLN6Q9NWW5 AC098799.1-201ENST00000504752 800 ntBASIC2.05□□□□□ -2.08
CLN6Q9NWW5 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.05□□□□□ -2.08
CLN6Q9NWW5 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.05□□□□□ -2.08
CLN6Q9NWW5 AC098826.3-201ENST00000603823 466 ntBASIC2.05□□□□□ -2.08
CLN6Q9NWW5 AL355598.1-201ENST00000604169 202 ntBASIC2.05□□□□□ -2.08
CLN6Q9NWW5 AC007621.1-201ENST00000604544 437 ntBASIC2.05□□□□□ -2.08
CLN6Q9NWW5 AL161798.1-201ENST00000604630 131 ntBASIC2.05□□□□□ -2.08
CLN6Q9NWW5 AL158050.2-201ENST00000605336 568 ntBASIC2.05□□□□□ -2.08
CLN6Q9NWW5 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.05□□□□□ -2.08
CLN6Q9NWW5 AC079416.3-201ENST00000624479 549 ntBASIC2.05□□□□□ -2.08
CLN6Q9NWW5 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.05□□□□□ -2.08
CLN6Q9NWW5 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.05□□□□□ -2.08
CLN6Q9NWW5 MTND4P35-201ENST00000604257 1375 ntBASIC2.05□□□□□ -2.08
CLN6Q9NWW5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms