Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 RNU6-1179P-201ENST00000384667 107 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 RPS4XP7-201ENST00000406274 780 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 Y_RNA.615-201ENST00000410769 117 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 RAB28P1-201ENST00000411517 641 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 AC108032.1-201ENST00000416706 207 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 RPL17P36-201ENST00000420302 549 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 AC099548.1-201ENST00000421443 426 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 AL500522.2-201ENST00000448562 343 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 snoU13.28-201ENST00000459235 104 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 AC010618.1-201ENST00000469924 477 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 RPL21P93-201ENST00000480465 489 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 AC112206.3-201ENST00000514578 389 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 RNU2-69P-201ENST00000516061 100 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 MRPL49P2-201ENST00000521066 465 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 MIR5684-201ENST00000585074 65 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 AC073539.2-201ENST00000597113 165 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 AC103710.3-201ENST00000608157 948 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 MIR6758-201ENST00000620653 63 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 AC073308.1-201ENST00000623696 305 ntBASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LIN7CQ9NUP9 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
LIN7CQ9NUP9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
LIN7CQ9NUP9 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
LIN7CQ9NUP9 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 AC126755.2-208ENST00000327792 462 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 AC138969.1-213ENST00000331436 462 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 RNU6-884P-201ENST00000363889 107 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 SNORA70.2-201ENST00000364506 135 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 RNU6-434P-201ENST00000384376 107 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 RNU6-876P-201ENST00000391295 104 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 RPS26P8-201ENST00000393490 348 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 FGF7P8-201ENST00000402994 292 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 AC009237.5-201ENST00000414271 501 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 MTND4LP11-201ENST00000422184 280 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 RPL23AP82-202ENST00000427528 469 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 RANP8-201ENST00000444720 713 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 RN7SL385P-201ENST00000468873 276 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 AP002812.1-201ENST00000495378 474 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 AC018710.1-201ENST00000506509 158 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 MTND3P25-201ENST00000509243 135 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 RNA5SP143-201ENST00000516936 115 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 CENPUP1-201ENST00000526649 1202 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 AP000867.2-201ENST00000532468 320 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 MIR4644-201ENST00000579929 84 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 AC007938.3-201ENST00000604965 623 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 HMGB1P50-201ENST00000605814 607 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 AC092807.2-201ENST00000609367 243 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 AC006504.8-201ENST00000621046 635 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 PLCE1P1-201ENST00000622094 305 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 AC100810.6-201ENST00000638068 285 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 NCAPGP1-201ENST00000505112 1814 ntBASIC3.33□□□□□ -1.88
LIN7CQ9NUP9 MAPK10-372ENST00000641954 3413 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 UBE3AP2-201ENST00000429033 2259 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 SNORD3E-201ENST00000362899 217 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 Y_RNA.86-201ENST00000363020 111 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 SNORA70C-201ENST00000384538 135 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 MT-TL1-201ENST00000386347 75 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AL138878.1-201ENST00000405131 347 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AL356776.1-201ENST00000406574 447 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 BX682237.1-201ENST00000415016 335 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 MYL8P-204ENST00000431574 518 ntBASIC3.32□□□□□ -1.88
LIN7CQ9NUP9 AC073063.1-201ENST00000434352 607 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms