Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 HPRT1P3-201ENST00000539521 576 ntBASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 DNAJC8P1-201ENST00000554535 372 ntBASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 MTCO3P24-201ENST00000572729 782 ntBASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 Z94722.1-201ENST00000604328 474 ntBASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 AL136313.1-201ENST00000624804 202 ntBASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 AC010149.2-201ENST00000637608 315 ntBASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 AC108206.1-201ENST00000570186 4159 ntBASIC3.61□□□□□ -1.83
SMC4Q9NTJ3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 RNU6-799P-201ENST00000363567 107 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 RNU5E-5P-201ENST00000365379 116 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 SNORD116-1-201ENST00000384335 95 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 AL592148.1-201ENST00000413568 445 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 RPL7P10-201ENST00000417407 739 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 USP9YP13-201ENST00000417797 480 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 AL135938.1-201ENST00000443141 297 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 AL590365.1-201ENST00000450788 243 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 SNRPFP4-201ENST00000456366 242 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 AC092798.1-201ENST00000458542 409 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 AL160314.1-201ENST00000490836 438 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 HIGD1AP13-201ENST00000509878 289 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 AC117532.1-201ENST00000514638 323 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 AL356057.1-201ENST00000533798 831 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 AC012065.4-201ENST00000602445 679 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 AL358072.1-201ENST00000604156 575 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 AC239868.4-201ENST00000608318 671 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 LRRC77P-213ENST00000637727 880 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 MTND4P4-201ENST00000439033 1366 ntBASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SMC4Q9NTJ3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 RNU5F-7P-201ENST00000363696 115 ntBASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 AC006366.1-201ENST00000422002 759 ntBASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 AC104332.2-201ENST00000429959 156 ntBASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 AP000936.2-201ENST00000447151 681 ntBASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 AL031183.1-201ENST00000457667 207 ntBASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 AC104472.2-201ENST00000469035 601 ntBASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 KC877373.1-201ENST00000479066 408 ntBASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 AC106782.4-201ENST00000568264 210 ntBASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 AC006504.3-201ENST00000586818 523 ntBASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 AC004908.3-201ENST00000610248 625 ntBASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 BX664608.1-201ENST00000610519 487 ntBASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 AC131902.3-201ENST00000611767 581 ntBASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 AC009878.1-201ENST00000621819 340 ntBASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SMC4Q9NTJ3 AC092104.1-201ENST00000497346 1441 ntBASIC3.59□□□□□ -1.84
SMC4Q9NTJ3 AC092435.3-201ENST00000565538 3654 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 AL137003.2-201ENST00000606924 2538 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 U3.4-201ENST00000363352 213 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 RNU6-198P-201ENST00000384258 104 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 BMS1P22-201ENST00000414726 313 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 ZNF863P-201ENST00000426746 417 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 AC007919.1-201ENST00000429380 217 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 AL513043.1-201ENST00000439124 535 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 MTATP6P30-201ENST00000443540 664 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 COX6CP2-201ENST00000444980 225 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 Z83846.1-201ENST00000446798 265 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 AL590639.1-201ENST00000456484 337 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 AC117522.2-201ENST00000510049 657 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 FABP5P5-201ENST00000515537 406 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 SNORA31.3-201ENST00000516029 96 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 RNU6-928P-201ENST00000516876 104 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 AC107934.1-201ENST00000522215 217 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 AC022878.1-201ENST00000530684 149 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 RPS3AP4-201ENST00000555161 764 ntBASIC3.58□□□□□ -1.84
SMC4Q9NTJ3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms