Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC009268.2-201ENST00000621925 457 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AL138960.2-201ENST00000625145 535 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AC106858.1-201ENST00000637497 429 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 LINC02211-204ENST00000642024 1070 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AC099063.3-201ENST00000642066 185 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.11□□□□□ -2.07
TREX1Q9NSU2 AL390862.1-201ENST00000635467 1469 ntBASIC2.11□□□□□ -2.07
TREX1Q9NSU2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
TREX1Q9NSU2 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AC009487.4-201ENST00000624969 3585 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TREX1Q9NSU2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TREX1Q9NSU2 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TREX1Q9NSU2 RNU6-884P-201ENST00000363889 107 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 SNORA3A-201ENST00000364113 130 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
TREX1Q9NSU2 RPL23AP29-201ENST00000397284 453 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AL445529.1-201ENST00000398713 389 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 TXNP7-201ENST00000406296 293 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 SNORD23.1-201ENST00000408212 104 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AL356320.1-201ENST00000429616 163 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.1□□□□□ -2.07
TREX1Q9NSU2 PSPHP1-201ENST00000450062 261 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AC107626.1-201ENST00000471084 183 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AC109486.1-201ENST00000486833 374 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 RPS29P20-201ENST00000489592 171 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 GTF2IP9-201ENST00000502460 301 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AC023141.11-201ENST00000508864 202 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AC022447.1-201ENST00000515358 464 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 NRON-201ENST00000517270 370 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AP005902.1-201ENST00000521358 186 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AC010376.1-201ENST00000522101 334 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.1□□□□□ -2.07
TREX1Q9NSU2 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
TREX1Q9NSU2 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.1□□□□□ -2.07
TREX1Q9NSU2 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 CYCSP2-201ENST00000558168 301 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.1□□□□□ -2.07
TREX1Q9NSU2 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AL357094.1-201ENST00000603845 844 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 AL138478.1-201ENST00000612252 832 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 MTND1P37-201ENST00000636562 264 ntBASIC2.1□□□□□ -2.07
TREX1Q9NSU2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.1□□□□□ -2.07
TREX1Q9NSU2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TREX1Q9NSU2 RNU6-560P-201ENST00000364007 108 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 RNU1-91P-201ENST00000364746 163 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 RNA5SP37-201ENST00000365420 130 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 RNU6-413P-201ENST00000384115 107 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 RNU6-432P-201ENST00000384196 109 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 MIR1284-201ENST00000408337 120 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 RNU2-33P-201ENST00000410344 192 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 RNU2-49P-201ENST00000410666 184 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 UBE2FP1-201ENST00000416536 447 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.09□□□□□ -2.07
TREX1Q9NSU2 EIF4EP4-201ENST00000424916 578 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.09□□□□□ -2.07
TREX1Q9NSU2 AL031659.1-201ENST00000447075 539 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 RPL23AP7-203ENST00000449021 469 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 AL021397.1-201ENST00000451806 248 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.09□□□□□ -2.07
TREX1Q9NSU2 MTND1P9-201ENST00000453775 944 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 RPL26P9-201ENST00000457466 433 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 AC104982.1-201ENST00000478775 574 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 HMGB1P36-201ENST00000487709 576 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.09□□□□□ -2.07
TREX1Q9NSU2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.09□□□□□ -2.07
TREX1Q9NSU2 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.09□□□□□ -2.07
TREX1Q9NSU2 AC091163.3-201ENST00000518269 1144 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.09□□□□□ -2.07
TREX1Q9NSU2 AC021451.1-201ENST00000523498 1129 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 AF038458.1-201ENST00000588406 262 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 AC025588.2-201ENST00000604851 466 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 AC107214.2-201ENST00000608204 634 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 AC131235.4-201ENST00000609288 620 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 FTX_3.1-201ENST00000610451 147 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 AL031601.2-202ENST00000622650 282 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 IGHVIII-44-202ENST00000636235 289 ntBASIC2.09□□□□□ -2.07
TREX1Q9NSU2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
TREX1Q9NSU2 AC080128.1-201ENST00000474389 1917 ntBASIC2.09□□□□□ -2.08
TREX1Q9NSU2 RNA5SP160-201ENST00000364866 120 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 RNU6-744P-201ENST00000365557 107 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 RNU6-1316P-201ENST00000384242 108 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 RNU6-754P-201ENST00000391166 107 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 U3.40-201ENST00000408706 208 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 SNORA11.4-201ENST00000408823 129 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 AL953862.1-201ENST00000423016 168 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 ZYG11AP1-201ENST00000430329 837 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.08□□□□□ -2.08
TREX1Q9NSU2 EEF1B2P7-201ENST00000451177 676 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 MTATP6P7-201ENST00000453315 681 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 RNU6-717P-201ENST00000459076 104 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 AC025033.1-201ENST00000463883 194 ntBASIC2.08□□□□□ -2.08
TREX1Q9NSU2 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.08□□□□□ -2.08
TREX1Q9NSU2 RPS20P22-201ENST00000473700 357 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms