Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AC017083.1-201ENST00000428093 483 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS45Q9NRW7 MED13P1-201ENST00000428342 171 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 TAAR7P-201ENST00000436141 242 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 RPS15AP9-201ENST00000439856 381 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 BNIP3P2-201ENST00000441221 577 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 BX510359.1-201ENST00000456973 237 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 RNU6-261P-201ENST00000459506 102 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 RPS20P20-201ENST00000460498 340 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.81□□□□□ -1.8
VPS45Q9NRW7 AC069439.1-201ENST00000494739 167 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 HSPD1P15-201ENST00000505573 1122 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 RN7SKP57-201ENST00000517248 293 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 RNU6-840P-201ENST00000517275 65 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 AC022695.1-201ENST00000522089 237 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.81□□□□□ -1.8
VPS45Q9NRW7 AC008489.1-201ENST00000524271 483 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS45Q9NRW7 AL355836.1-201ENST00000555951 870 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 HMGB1P14-201ENST00000557424 591 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS45Q9NRW7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS45Q9NRW7 NRBF2P5-201ENST00000603087 788 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 SDR42E1P2-201ENST00000614861 481 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 AC002076.2-201ENST00000617362 122 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 MIR6076-201ENST00000617521 113 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 DUXAP9-208ENST00000622815 614 ntBASIC3.81□□□□□ -1.8
VPS45Q9NRW7 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS45Q9NRW7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS45Q9NRW7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS45Q9NRW7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS45Q9NRW7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS45Q9NRW7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 RNA5SP50-201ENST00000363731 107 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 RNU5E-4P-201ENST00000364931 120 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 RNU6-606P-201ENST00000384721 111 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AC068050.1-201ENST00000394891 380 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 HSPE1P8-201ENST00000406997 288 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 RNU6-908P-201ENST00000410160 94 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 UBE2FP1-201ENST00000416536 447 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 BX842559.1-201ENST00000419615 532 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AL109913.1-201ENST00000421173 514 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 RPL21P109-201ENST00000422213 475 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 TMEM167AP1-201ENST00000423409 219 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 OR2AS1P-201ENST00000427827 319 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 NEK4P1-201ENST00000433383 879 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AL606489.2-201ENST00000433886 234 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 CALM1P1-201ENST00000442082 433 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 DDX3P2-201ENST00000446138 111 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 SNORD105B-201ENST00000458770 79 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 RPL23AP62-201ENST00000463396 453 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 RPS20P22-201ENST00000473700 357 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 RNU6-358P-201ENST00000516564 75 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 ATP5F1P5-201ENST00000526403 760 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AL121579.1-201ENST00000555129 305 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AC034105.3-201ENST00000565294 442 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 MIR4293-201ENST00000584305 78 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AL020991.1-201ENST00000612314 373 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AC090132.2-201ENST00000615881 347 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AL138880.2-201ENST00000616214 239 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 FRG1KP-201ENST00000623592 341 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AL137003.2-201ENST00000606924 2538 ntBASIC3.8□□□□□ -1.8
VPS45Q9NRW7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS45Q9NRW7 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS45Q9NRW7 CKAP2P1-201ENST00000555477 2049 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 Y_RNA.38-201ENST00000362617 102 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 RNA5SP51-201ENST00000364750 119 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 Y_RNA.303-201ENST00000364998 94 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 MIR493-201ENST00000385254 89 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 RNU6-1158P-201ENST00000391167 107 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 FAT1P1-201ENST00000406588 507 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 ATP5A1P2-201ENST00000412323 255 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 RPL21P24-201ENST00000413752 448 ntBASIC3.79□□□□□ -1.8
VPS45Q9NRW7 SNRPEP10-201ENST00000420249 274 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms