Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 RPL35AP22-201ENST00000436855 335 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 AC020550.1-201ENST00000447385 163 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 TPT1P14-201ENST00000448018 505 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 AC013267.1-201ENST00000458227 267 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 SNORD109B-201ENST00000458961 67 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 SNORD109A-201ENST00000459128 67 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 AC069528.1-202ENST00000482888 637 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 AL512347.1-201ENST00000566420 503 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 MIR3167-201ENST00000579623 85 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 UBE2L4-201ENST00000587688 464 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 AL096840.1-201ENST00000603287 93 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 DPPA3P3-201ENST00000603842 430 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 AC018926.1-201ENST00000616335 435 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 AL158801.5-201ENST00000623123 465 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 MTND5P30-201ENST00000452896 1731 ntBASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
VCX3AQ9NNX9 ADAM3A-203ENST00000461344 2157 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 RNU6-223P-201ENST00000362830 107 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 RNU6-1167P-201ENST00000363227 94 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 RNU6-289P-201ENST00000364093 107 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 RNA5SP80-201ENST00000410475 111 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 RNU2-68P-201ENST00000410878 191 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 RNA5SP270-201ENST00000411361 118 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 AC107081.1-201ENST00000414975 361 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 RPL31P63-201ENST00000422565 375 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 PTP4A1P7-201ENST00000423476 514 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 AC004383.1-201ENST00000438135 289 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 AL161651.1-201ENST00000440882 223 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 PRSS3P4-201ENST00000453323 162 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 AC008481.1-201ENST00000463278 396 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 AC010631.1-201ENST00000474150 156 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 AC104563.1-201ENST00000476147 376 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 AF213884.2-201ENST00000510417 903 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 SNORD19.2-201ENST00000516978 73 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 SNORA31.23-201ENST00000517219 133 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 NRBF2P1-201ENST00000587407 859 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 AL451007.1-201ENST00000595491 289 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 AP001486.3-201ENST00000615334 372 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 AC024581.2-201ENST00000619986 252 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 OR1S1-201ENST00000624470 978 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 AC092447.10-201ENST00000620607 1652 ntBASIC1.92□□□□□ -2.1
VCX3AQ9NNX9 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 RNU1-91P-201ENST00000364746 163 ntBASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 MIR449B-201ENST00000384995 97 ntBASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 RN7SKP158-201ENST00000410453 326 ntBASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 NANOGP5-201ENST00000424456 877 ntBASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 AL353729.1-201ENST00000425044 720 ntBASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 RPL23AP76-201ENST00000441860 458 ntBASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 AP001324.2-201ENST00000461163 319 ntBASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 AC008526.1-201ENST00000509149 338 ntBASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 AC093752.1-206ENST00000511823 336 ntBASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 AC008837.2-201ENST00000513076 418 ntBASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 AC110760.3-202ENST00000515177 371 ntBASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 AC021451.1-201ENST00000523498 1129 ntBASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 ROCK1P1-201ENST00000573767 549 ntBASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 AC098826.3-201ENST00000603823 466 ntBASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 AL161798.1-201ENST00000604630 131 ntBASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 AL158211.2-201ENST00000607282 395 ntBASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.91□□□□□ -2.1
VCX3AQ9NNX9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.9□□□□□ -2.1
VCX3AQ9NNX9 AL359854.1-201ENST00000614203 1594 ntBASIC1.9□□□□□ -2.1
VCX3AQ9NNX9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 RNU6-777P-201ENST00000364265 104 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 NDUFB4P4-201ENST00000404822 243 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 RNU2-72P-201ENST00000411175 163 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 USP9YP26-201ENST00000421008 661 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 AL139413.1-201ENST00000421309 217 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms