Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AC109927.2-201ENST00000506416 303 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 SNORA31.26-201ENST00000517250 137 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AC107934.2-201ENST00000518653 310 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AC068657.1-201ENST00000520807 306 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 MTCO3P24-201ENST00000572729 782 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AC004223.2-201ENST00000590309 544 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AL158032.1-201ENST00000605401 106 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AL157786.1-207ENST00000627771 695 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 DPY19L2P2-203ENST00000435536 1858 ntBASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.98□□□□□ -1.93
CHMP1AQ9HD42 AC004972.1-201ENST00000623934 2209 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 MTND5P17-201ENST00000418405 1603 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AC007823.1-201ENST00000569932 1566 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 MIR454-201ENST00000390180 115 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 MIR888-201ENST00000401186 77 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AL031121.1-201ENST00000406553 254 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 RNU2-9P-201ENST00000410194 145 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 RNU2-68P-201ENST00000410878 191 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AL031779.1-201ENST00000415663 330 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 MTATP6P18-201ENST00000417994 673 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 SKA2P1-201ENST00000425592 390 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AP000907.1-201ENST00000428428 510 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 RPS29P7-201ENST00000439662 171 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 TPT1P12-201ENST00000448968 492 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AC021205.2-201ENST00000480069 347 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 RPS29P20-201ENST00000489592 171 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AC010493.1-201ENST00000513479 292 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 SNORA64.4-201ENST00000516632 81 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AP003122.3-201ENST00000526316 255 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AC084851.1-201ENST00000529105 249 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 OR5AL2P-201ENST00000532185 920 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AC026333.2-201ENST00000542164 106 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AL359212.1-201ENST00000556608 614 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 MIR5685-201ENST00000579080 79 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 MIR4775-201ENST00000581168 75 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AC006557.5-201ENST00000603126 811 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AC007684.1-201ENST00000609671 477 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AC087241.4-201ENST00000612441 480 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AC015540.1-201ENST00000615828 501 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AL357559.1-201ENST00000622228 274 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AC099506.2-201ENST00000623074 221 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AL512643.1-201ENST00000635735 524 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 OR5AK4P-201ENST00000635912 903 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AL392088.2-201ENST00000637607 285 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 AC092435.3-201ENST00000565538 3654 ntBASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CHMP1AQ9HD42 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 Y_RNA.1-201ENST00000352915 104 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 RNU6-778P-201ENST00000363269 103 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 SNORA62.1-201ENST00000364287 154 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 SNORD115-7-201ENST00000365306 82 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 U8.9-201ENST00000365667 134 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 SNORA56-201ENST00000383966 129 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 Y_RNA.576-201ENST00000384781 102 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AC068050.1-201ENST00000394891 380 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 UBE2V1P2-201ENST00000397758 440 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 RNU4-55P-201ENST00000410731 137 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AL353193.1-201ENST00000421444 268 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AC069157.1-201ENST00000421749 137 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AL591704.1-201ENST00000432574 275 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AC002486.1-201ENST00000435098 391 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AC093392.2-201ENST00000450682 337 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 RN7SL594P-201ENST00000470590 287 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 RPL9P6-201ENST00000492764 598 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AC107401.1-201ENST00000503426 685 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AC098591.2-201ENST00000510152 315 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 OR4R1P-201ENST00000529879 463 ntBASIC2.96□□□□□ -1.94
CHMP1AQ9HD42 OR8R1P-201ENST00000543943 764 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms