Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 FTLP6-201ENST00000355274 422 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 RNU6-799P-201ENST00000363567 107 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 RNU6-270P-201ENST00000364131 105 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 RNA5SP479-201ENST00000364858 117 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 AP002088.1-201ENST00000382740 395 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 RNU6-14P-201ENST00000384630 106 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 RNU2-68P-201ENST00000410878 191 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 RNA5SP31-201ENST00000411144 127 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 RPS12P24-201ENST00000412619 387 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 AC126124.2-201ENST00000413542 321 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 Z99755.1-201ENST00000414048 380 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 AC093578.1-201ENST00000415219 368 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 SYF2P2-201ENST00000417620 583 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 MTATP6P18-201ENST00000417994 673 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 SDCBPP3-201ENST00000419629 891 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 HMGN2P30-201ENST00000423237 256 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 MTATP6P16-201ENST00000434543 526 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 HSPD1P21-201ENST00000436541 245 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 FABP5P15-201ENST00000453566 214 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 RNU7-23P-201ENST00000459465 62 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 AC106707.2-201ENST00000484182 374 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 RPL9P6-201ENST00000492764 598 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 RPL37P25-201ENST00000507308 276 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 Y_RNA.689-201ENST00000516589 107 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 MTCYBP20-201ENST00000524239 1129 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 OR5AL2P-201ENST00000532185 920 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 ADI1P3-201ENST00000549509 470 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 AC068790.6-201ENST00000602558 258 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 AC012507.3-201ENST00000603556 477 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 AL355598.1-201ENST00000604169 202 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 AC130324.3-201ENST00000614165 542 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 AL359547.2-201ENST00000615810 418 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 AC099506.2-201ENST00000623074 221 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 AC025034.2-201ENST00000623264 286 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 AC009093.8-201ENST00000641769 292 ntBASIC3.28□□□□□ -1.88
BRF2Q9HAW0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
BRF2Q9HAW0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
BRF2Q9HAW0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.28□□□□□ -1.89
BRF2Q9HAW0 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 AL021368.2-201ENST00000606125 5352 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 AC091564.4-201ENST00000533934 2194 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 Y_RNA.3-201ENST00000362331 103 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 SNORA24.1-201ENST00000384401 135 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 MIR301A-201ENST00000385261 86 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 RN7SKP202-201ENST00000410439 330 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 AL109913.1-201ENST00000421173 514 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 AL451062.2-201ENST00000427515 271 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 HMGB1P9-201ENST00000429856 646 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 ATP5JP1-201ENST00000431631 322 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 BX679664.1-201ENST00000434429 253 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 RPL37P4-201ENST00000448908 268 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 AC006512.1-201ENST00000468816 291 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 AC104472.2-201ENST00000469035 601 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 AC026801.1-201ENST00000497178 464 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 AC110768.1-201ENST00000509222 400 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 AC104619.4-201ENST00000510773 249 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 MIR2276-201ENST00000516886 89 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 OR5B19P-201ENST00000531766 928 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 AC106785.1-201ENST00000565935 262 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 AC004805.2-201ENST00000605382 482 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 AC022893.3-201ENST00000607665 437 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 AC122108.2-201ENST00000611946 526 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 DUSP12P1-201ENST00000612874 516 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 GABRG2-229ENST00000641017 3628 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
BRF2Q9HAW0 AC008669.1-201ENST00000565823 2178 ntBASIC3.27□□□□□ -1.89
BRF2Q9HAW0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
BRF2Q9HAW0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.26□□□□□ -1.89
BRF2Q9HAW0 AC007496.3-201ENST00000624987 3443 ntBASIC3.26□□□□□ -1.89
BRF2Q9HAW0 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms