Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 SMIM11P1-201ENST00000369586 178 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 RNU6-946P-201ENST00000383878 107 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 RNU6-890P-201ENST00000384121 107 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 RNU6-505P-201ENST00000384427 107 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 Y_RNA.557-201ENST00000384680 107 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 SNORA16.2-201ENST00000390991 127 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 RPL30P3-201ENST00000424262 333 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 AC007389.2-201ENST00000434630 306 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 HMGB1P12-201ENST00000438594 598 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 GAPDHP27-201ENST00000447427 1020 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 AC087385.1-201ENST00000475062 312 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 RN7SL283P-201ENST00000489055 303 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 RPL7P23-201ENST00000493874 747 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 AC015911.1-201ENST00000495111 156 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 RPL23AP55-201ENST00000498163 452 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 AC116655.1-201ENST00000508324 901 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 RN7SKP82-201ENST00000516786 223 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 AC091516.1-201ENST00000549191 703 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 AL161670.1-201ENST00000554348 137 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 AC010653.1-201ENST00000571108 881 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 AC005255.1-201ENST00000593748 216 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 AC006254.3-201ENST00000603353 884 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 AL138889.2-201ENST00000603883 242 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 AC090425.1-201ENST00000610007 140 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 U2.17-201ENST00000611454 95 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 MIR6130-201ENST00000619419 109 ntBASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
BCAS3Q9H6U6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 SNORA71.3-201ENST00000362582 128 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 SNORD46.1-201ENST00000364139 104 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 RNU1-115P-201ENST00000365329 160 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 RNU6-784P-201ENST00000384330 106 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 RNY1P14-201ENST00000384426 108 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 SNORD3H-201ENST00000384486 214 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 MT-TR-201ENST00000387439 65 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 RPL21P24-201ENST00000413752 448 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 AC093151.1-201ENST00000427711 313 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 AC128713.1-201ENST00000471495 306 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 TRBV1-201ENST00000476502 284 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 PPIAP15-201ENST00000479662 484 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 MRPS35P2-201ENST00000508242 191 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 AC026782.1-201ENST00000512952 449 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 Y_RNA.708-201ENST00000516950 96 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 RNU6-1213P-201ENST00000517075 94 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 AC007991.1-201ENST00000522680 631 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 AL669831.4-202ENST00000590817 238 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 AC006329.2-201ENST00000611491 394 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 TUG1_2.1-201ENST00000614234 87 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 AL162373.1-201ENST00000620433 407 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 AL773545.4-201ENST00000637262 310 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 AL513478.4-201ENST00000641636 310 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
BCAS3Q9H6U6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 AC106871.1-201ENST00000568324 3102 ntBASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 RNU1-108P-201ENST00000362556 161 ntBASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 RNU6-490P-201ENST00000362985 107 ntBASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 Y_RNA.176-201ENST00000363815 109 ntBASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 Y_RNA.364-201ENST00000365532 101 ntBASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 AC019155.1-201ENST00000382242 574 ntBASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 RNU6ATAC-201ENST00000408749 126 ntBASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 AL591704.1-201ENST00000432574 275 ntBASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 AL353597.2-202ENST00000434901 373 ntBASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 MTCO3P45-201ENST00000443036 613 ntBASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 AL162389.1-201ENST00000449233 177 ntBASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 BX276092.4-201ENST00000452056 248 ntBASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 RPL31P61-201ENST00000496160 376 ntBASIC4.44□□□□□ -1.7
BCAS3Q9H6U6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms