Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC126182.1-201ENST00000478134 357 ntBASIC2.81□□□□□ -1.96
RPAP3Q9H6T3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
RPAP3Q9H6T3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.81□□□□□ -1.96
RPAP3Q9H6T3 RNA5SP281-201ENST00000516504 135 ntBASIC2.81□□□□□ -1.96
RPAP3Q9H6T3 SNORA31.18-201ENST00000517043 134 ntBASIC2.81□□□□□ -1.96
RPAP3Q9H6T3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.81□□□□□ -1.96
RPAP3Q9H6T3 COX6CP5-201ENST00000527162 228 ntBASIC2.81□□□□□ -1.96
RPAP3Q9H6T3 OR4R1P-201ENST00000529879 463 ntBASIC2.81□□□□□ -1.96
RPAP3Q9H6T3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.81□□□□□ -1.96
RPAP3Q9H6T3 AC124947.2-202ENST00000552735 133 ntBASIC2.81□□□□□ -1.96
RPAP3Q9H6T3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.81□□□□□ -1.96
RPAP3Q9H6T3 TPMTP1-201ENST00000592307 737 ntBASIC2.81□□□□□ -1.96
RPAP3Q9H6T3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.81□□□□□ -1.96
RPAP3Q9H6T3 AC107952.2-201ENST00000606048 486 ntBASIC2.81□□□□□ -1.96
RPAP3Q9H6T3 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.81□□□□□ -1.96
RPAP3Q9H6T3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.81□□□□□ -1.96
RPAP3Q9H6T3 CR848007.1-201ENST00000442354 1699 ntBASIC2.81□□□□□ -1.96
RPAP3Q9H6T3 AC069528.2-201ENST00000624849 1991 ntBASIC2.81□□□□□ -1.96
RPAP3Q9H6T3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 DDX10P1-201ENST00000448545 1933 ntBASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 PABPC1P9-201ENST00000426076 1612 ntBASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 RNU6-433P-201ENST00000363216 104 ntBASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 SNORA72.3-201ENST00000365074 132 ntBASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 CCNG1P1-201ENST00000406783 885 ntBASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 AL590383.1-201ENST00000428602 75 ntBASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 AC007919.1-201ENST00000429380 217 ntBASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 FAM103A2P-201ENST00000444122 354 ntBASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 TPT1P14-201ENST00000448018 505 ntBASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 OR6C5P-201ENST00000452388 923 ntBASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 AP000705.1-201ENST00000454567 350 ntBASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 ATG12P2-201ENST00000456830 416 ntBASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 MIR5092-201ENST00000583139 88 ntBASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 AL031281.1-201ENST00000604049 488 ntBASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 PCMTD1P7-201ENST00000634506 357 ntBASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 AC009902.3-201ENST00000606235 2172 ntBASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 AL138713.1-201ENST00000624026 2130 ntBASIC2.8□□□□□ -1.96
RPAP3Q9H6T3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 RNU6-931P-201ENST00000363850 107 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 RNU6-461P-201ENST00000364195 107 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AL513475.1-201ENST00000406602 315 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 SPA17P1-201ENST00000416656 452 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AL512844.2-201ENST00000433990 593 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AL353705.4-201ENST00000449661 238 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AC011753.1-201ENST00000451001 220 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 RNU6-420P-201ENST00000458780 107 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 SNORD11.1-201ENST00000459482 85 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 RPL23AP11-201ENST00000475260 469 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 RN7SL297P-201ENST00000483161 293 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 RPL36AP51-201ENST00000487216 318 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 RPS15AP36-201ENST00000492022 382 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AC034222.1-201ENST00000494052 532 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AC104685.1-201ENST00000502445 371 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AC026436.1-201ENST00000510537 270 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 RNA5SP82-201ENST00000516707 92 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AC023538.1-201ENST00000534576 736 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AC004486.1-201ENST00000546846 233 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AMZ2P1-203ENST00000565833 850 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AC068135.2-201ENST00000569293 1028 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AC136618.2-201ENST00000575091 400 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 BNIP3P23-201ENST00000599655 511 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AP002782.1-201ENST00000623107 614 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 MIR1291-201ENST00000627649 87 ntBASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RPAP3Q9H6T3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 MTND4P16-201ENST00000466108 1367 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 RPL21P132-201ENST00000331267 462 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 RNU6-432P-201ENST00000384196 109 ntBASIC2.78□□□□□ -1.96
RPAP3Q9H6T3 MIR524-201ENST00000385242 87 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms