Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 Y_RNA.46-201ENST00000362695 102 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 RNU6-501P-201ENST00000364072 100 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 U8.8-201ENST00000365399 135 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 SNORD116-8-201ENST00000384365 95 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 MIR19A-201ENST00000384878 82 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 RNU6-1077P-201ENST00000410506 102 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 RNU6-516P-201ENST00000411381 104 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 MTND2P18-201ENST00000419962 1030 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AC233728.2-201ENST00000425348 757 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.79□□□□□ -1.96
RNF41Q9H4P4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.79□□□□□ -1.96
RNF41Q9H4P4 EEF1B2P7-201ENST00000451177 676 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AP000705.1-201ENST00000454567 350 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AL359385.1-201ENST00000456509 365 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.79□□□□□ -1.96
RNF41Q9H4P4 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.79□□□□□ -1.96
RNF41Q9H4P4 SNORD59.2-201ENST00000516873 68 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AC025881.1-201ENST00000518851 512 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AP000889.1-201ENST00000530968 660 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AC007834.2-201ENST00000536310 343 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.79□□□□□ -1.96
RNF41Q9H4P4 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.79□□□□□ -1.96
RNF41Q9H4P4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.79□□□□□ -1.96
RNF41Q9H4P4 PCMTD1P2-201ENST00000565017 355 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AC109446.2-201ENST00000567872 497 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AC012435.1-202ENST00000568772 240 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AC105137.2-201ENST00000569073 466 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.79□□□□□ -1.96
RNF41Q9H4P4 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AC025811.1-201ENST00000604312 472 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AC007938.3-201ENST00000604965 623 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 RPL23AP88-201ENST00000605759 454 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AC046143.2-201ENST00000609789 160 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AC093838.1-201ENST00000613014 469 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AC009159.1-201ENST00000618386 642 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 AC019226.1-201ENST00000625666 515 ntBASIC2.79□□□□□ -1.96
RNF41Q9H4P4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
RNF41Q9H4P4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
RNF41Q9H4P4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.78□□□□□ -1.96
RNF41Q9H4P4 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.78□□□□□ -1.96
RNF41Q9H4P4 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
RNF41Q9H4P4 MIR493-201ENST00000385254 89 ntBASIC2.78□□□□□ -1.96
RNF41Q9H4P4 U8.14-201ENST00000390843 143 ntBASIC2.78□□□□□ -1.96
RNF41Q9H4P4 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.78□□□□□ -1.96
RNF41Q9H4P4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.78□□□□□ -1.96
RNF41Q9H4P4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.78□□□□□ -1.96
RNF41Q9H4P4 AL049734.2-201ENST00000441066 616 ntBASIC2.78□□□□□ -1.96
RNF41Q9H4P4 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.78□□□□□ -1.96
RNF41Q9H4P4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.78□□□□□ -1.96
RNF41Q9H4P4 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.78□□□□□ -1.96
RNF41Q9H4P4 AC128713.1-201ENST00000471495 306 ntBASIC2.78□□□□□ -1.96
RNF41Q9H4P4 AC109486.1-201ENST00000486833 374 ntBASIC2.78□□□□□ -1.96
RNF41Q9H4P4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.78□□□□□ -1.96
RNF41Q9H4P4 RPS27P27-201ENST00000498779 255 ntBASIC2.78□□□□□ -1.96
RNF41Q9H4P4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.78□□□□□ -1.96
RNF41Q9H4P4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
RNF41Q9H4P4 SNORA31.1-201ENST00000515993 133 ntBASIC2.78□□□□□ -1.96
RNF41Q9H4P4 SNORA31.5-201ENST00000516190 133 ntBASIC2.78□□□□□ -1.96
RNF41Q9H4P4 RNU6-798P-201ENST00000516912 103 ntBASIC2.78□□□□□ -1.96
RNF41Q9H4P4 AP002770.2-201ENST00000543613 532 ntBASIC2.78□□□□□ -1.96
RNF41Q9H4P4 AL512310.1-201ENST00000548639 172 ntBASIC2.78□□□□□ -1.96
RNF41Q9H4P4 AP005205.1-201ENST00000563503 508 ntBASIC2.78□□□□□ -1.96
RNF41Q9H4P4 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.78□□□□□ -1.96
RNF41Q9H4P4 MIR3921-201ENST00000577308 85 ntBASIC2.78□□□□□ -1.96
RNF41Q9H4P4 MIR5007-201ENST00000583098 95 ntBASIC2.78□□□□□ -1.96
RNF41Q9H4P4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.78□□□□□ -1.96
RNF41Q9H4P4 AC079089.3-201ENST00000603094 673 ntBASIC2.78□□□□□ -1.96
RNF41Q9H4P4 AL022161.1-201ENST00000604390 213 ntBASIC2.78□□□□□ -1.96
RNF41Q9H4P4 AL391813.2-201ENST00000609113 322 ntBASIC2.78□□□□□ -1.96
RNF41Q9H4P4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.78□□□□□ -1.96
RNF41Q9H4P4 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.78□□□□□ -1.96
RNF41Q9H4P4 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.77□□□□□ -1.97
RNF41Q9H4P4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RNF41Q9H4P4 MIR21-201ENST00000362134 72 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 RNU5F-6P-201ENST00000362979 116 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RNF41Q9H4P4 RPS20P2-201ENST00000402520 389 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 RNA5SP492-201ENST00000411330 114 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.77□□□□□ -1.97
RNF41Q9H4P4 AC018630.2-202ENST00000422992 927 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.77□□□□□ -1.97
RNF41Q9H4P4 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.77□□□□□ -1.97
RNF41Q9H4P4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.77□□□□□ -1.97
RNF41Q9H4P4 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.77□□□□□ -1.97
RNF41Q9H4P4 KATNBL1P6-201ENST00000453433 915 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.77□□□□□ -1.97
RNF41Q9H4P4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RNF41Q9H4P4 RPL31P60-201ENST00000478450 367 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RNF41Q9H4P4 AC010486.1-201ENST00000511793 424 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.77□□□□□ -1.97
RNF41Q9H4P4 AC106038.2-201ENST00000520706 568 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.77□□□□□ -1.97
RNF41Q9H4P4 ERHP1-201ENST00000523006 310 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 AC087373.1-201ENST00000524920 491 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms