Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RPS27P27-201ENST00000498779 255 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 AC146944.2-203ENST00000502493 354 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS11Q9H270 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS11Q9H270 AC139495.1-202ENST00000513164 354 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 RNU6-798P-201ENST00000516912 103 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 Y_RNA.721-201ENST00000517207 102 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 IGKV2-38-201ENST00000517443 247 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.23□□□□□ -1.73
VPS11Q9H270 HMGN1P28-201ENST00000521340 364 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
VPS11Q9H270 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS11Q9H270 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS11Q9H270 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.23□□□□□ -1.73
VPS11Q9H270 BNIP3P16-201ENST00000589779 534 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.23□□□□□ -1.73
VPS11Q9H270 AC006023.2-201ENST00000609916 167 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 AC006157.1-201ENST00000611750 366 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 AL049539.1-201ENST00000611964 459 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 AC012409.4-201ENST00000612923 249 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 AL138713.1-201ENST00000624026 2130 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 AL669831.3-213ENST00000636676 183 ntBASIC4.23□□□□□ -1.73
VPS11Q9H270 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
VPS11Q9H270 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
VPS11Q9H270 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
VPS11Q9H270 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.22□□□□□ -1.73
VPS11Q9H270 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VPS11Q9H270 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS11Q9H270 Y_RNA.482-201ENST00000384377 111 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 Y_RNA.489-201ENST00000384410 101 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 RNU6-601P-201ENST00000384540 107 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 RNU6-1109P-201ENST00000391187 107 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 UBE2V1P2-201ENST00000397758 440 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 AL136372.1-201ENST00000403060 228 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 MIR1179-201ENST00000408703 91 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VPS11Q9H270 AC011742.1-201ENST00000431448 434 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 MTATP6P16-201ENST00000434543 526 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS11Q9H270 FTH1P1-201ENST00000437933 532 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS11Q9H270 AL356535.1-201ENST00000440335 398 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.22□□□□□ -1.73
VPS11Q9H270 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.22□□□□□ -1.73
VPS11Q9H270 AC126389.1-201ENST00000477436 290 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 RPL22P13-201ENST00000493291 347 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS11Q9H270 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.22□□□□□ -1.73
VPS11Q9H270 RPL39P5-202ENST00000512505 151 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 IGLVIV-65-201ENST00000517313 360 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 SNRPGP16-201ENST00000533275 226 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 AC007375.1-201ENST00000554513 578 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 MIR3690-201ENST00000580266 75 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 COX6CP3-201ENST00000580869 223 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 AC012443.1-201ENST00000605605 231 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 AC100812.1-201ENST00000607622 580 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 AL355810.1-201ENST00000614629 552 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 AL450472.3-201ENST00000615578 367 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS11Q9H270 AC100827.5-201ENST00000615883 426 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS11Q9H270 MIR4275-201ENST00000636486 87 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VPS11Q9H270 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
VPS11Q9H270 KPNA2P1-201ENST00000458289 1591 ntBASIC4.22□□□□□ -1.73
VPS11Q9H270 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
VPS11Q9H270 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS11Q9H270 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
VPS11Q9H270 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
VPS11Q9H270 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
VPS11Q9H270 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
VPS11Q9H270 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
VPS11Q9H270 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
VPS11Q9H270 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS11Q9H270 Y_RNA.80-201ENST00000362996 102 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 RNU6-99P-201ENST00000364721 107 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 MIR19A-201ENST00000384878 82 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 RNU2-71P-201ENST00000411395 189 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 RPL7AP73-201ENST00000413490 353 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS11Q9H270 RPEP3-201ENST00000425462 676 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 SDAD1P3-201ENST00000427380 333 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 AC090774.1-201ENST00000435925 246 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS11Q9H270 AC006466.1-201ENST00000438721 289 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS11Q9H270 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS11Q9H270 RPS29P19-201ENST00000479709 171 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
VPS11Q9H270 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS11Q9H270 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.21□□□□□ -1.74
VPS11Q9H270 RNA5SP309-201ENST00000516670 106 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 RNU6-256P-201ENST00000516747 97 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.21□□□□□ -1.74
VPS11Q9H270 AL133271.1-201ENST00000538229 291 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 OR8R1P-201ENST00000543943 764 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 AC128657.1-201ENST00000549459 145 ntBASIC4.21□□□□□ -1.74
VPS11Q9H270 MIR4775-201ENST00000581168 75 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms