Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 AC048347.1-201ENST00000624621 427 ntBASIC0.52□□□□□ -2.33
CDH23Q9H251 AP003485.1-201ENST00000625093 753 ntBASIC0.52□□□□□ -2.33
CDH23Q9H251 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CDH23Q9H251 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CDH23Q9H251 SNORD95.1-201ENST00000364099 68 ntBASIC0.52□□□□□ -2.33
CDH23Q9H251 MTND2P16-201ENST00000419987 799 ntBASIC0.52□□□□□ -2.33
CDH23Q9H251 MTCO1P3-201ENST00000429327 192 ntBASIC0.52□□□□□ -2.33
CDH23Q9H251 RPS27P21-201ENST00000486977 252 ntBASIC0.52□□□□□ -2.33
CDH23Q9H251 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC0.52□□□□□ -2.33
CDH23Q9H251 AC118282.2-201ENST00000508739 374 ntBASIC0.52□□□□□ -2.33
CDH23Q9H251 AC239860.2-201ENST00000525886 270 ntBASIC0.52□□□□□ -2.33
CDH23Q9H251 AC118469.1-201ENST00000442943 488 ntBASIC0.51□□□□□ -2.33
CDH23Q9H251 AC103851.1-201ENST00000506833 274 ntBASIC0.51□□□□□ -2.33
CDH23Q9H251 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.51□□□□□ -2.33
CDH23Q9H251 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CDH23Q9H251 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC0.51□□□□□ -2.33
CDH23Q9H251 Y_RNA.132-201ENST00000363421 102 ntBASIC0.51□□□□□ -2.33
CDH23Q9H251 RNY3-201ENST00000365484 102 ntBASIC0.51□□□□□ -2.33
CDH23Q9H251 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.51□□□□□ -2.33
CDH23Q9H251 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.51□□□□□ -2.33
CDH23Q9H251 AL031601.2-202ENST00000622650 282 ntBASIC0.51□□□□□ -2.33
CDH23Q9H251 AC013244.3-201ENST00000605614 388 ntBASIC0.51□□□□□ -2.33
CDH23Q9H251 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
CDH23Q9H251 AL121769.1-201ENST00000469473 401 ntBASIC0.5□□□□□ -2.33
CDH23Q9H251 AC107918.3-201ENST00000533272 382 ntBASIC0.5□□□□□ -2.33
CDH23Q9H251 MIR5194-201ENST00000582634 120 ntBASIC0.5□□□□□ -2.33
CDH23Q9H251 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.5□□□□□ -2.33
CDH23Q9H251 RNU6-48P-201ENST00000384161 107 ntBASIC0.5□□□□□ -2.33
CDH23Q9H251 SFR1P1-201ENST00000403720 688 ntBASIC0.5□□□□□ -2.33
CDH23Q9H251 AL035666.1-201ENST00000446195 348 ntBASIC0.5□□□□□ -2.33
CDH23Q9H251 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.5□□□□□ -2.33
CDH23Q9H251 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.5□□□□□ -2.33
CDH23Q9H251 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC0.5□□□□□ -2.33
CDH23Q9H251 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.5□□□□□ -2.33
CDH23Q9H251 AC009974.1-201ENST00000608881 455 ntBASIC0.5□□□□□ -2.33
CDH23Q9H251 MIR203B-201ENST00000636080 86 ntBASIC0.5□□□□□ -2.33
CDH23Q9H251 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.5□□□□□ -2.33
CDH23Q9H251 MIR518A2-201ENST00000384966 87 ntBASIC0.49□□□□□ -2.33
CDH23Q9H251 AC006461.1-201ENST00000412637 326 ntBASIC0.49□□□□□ -2.33
CDH23Q9H251 AC073614.1-201ENST00000438690 650 ntBASIC0.49□□□□□ -2.33
CDH23Q9H251 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.49□□□□□ -2.33
CDH23Q9H251 IL33-203ENST00000456383 2501 ntTSL 5 BASIC0.49□□□□□ -2.33
CDH23Q9H251 AC087359.1-201ENST00000508335 1740 ntBASIC0.49□□□□□ -2.33
CDH23Q9H251 OR9R1P-201ENST00000412200 877 ntBASIC0.49□□□□□ -2.33
CDH23Q9H251 RPL31P60-201ENST00000478450 367 ntBASIC0.49□□□□□ -2.33
CDH23Q9H251 AC025857.1-201ENST00000525252 377 ntBASIC0.49□□□□□ -2.33
CDH23Q9H251 AC084373.1-201ENST00000603311 235 ntBASIC0.49□□□□□ -2.33
CDH23Q9H251 AP001005.3-201ENST00000622049 129 ntBASIC0.49□□□□□ -2.33
CDH23Q9H251 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC0.49□□□□□ -2.33
CDH23Q9H251 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
CDH23Q9H251 CBX3P1-201ENST00000325243 554 ntBASIC0.49□□□□□ -2.33
CDH23Q9H251 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.49□□□□□ -2.33
CDH23Q9H251 SNRPEP7-201ENST00000438350 220 ntBASIC0.49□□□□□ -2.33
CDH23Q9H251 SNRPGP17-201ENST00000603780 214 ntBASIC0.49□□□□□ -2.33
CDH23Q9H251 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
CDH23Q9H251 OR5H6-203ENST00000642105 978 ntBASIC0.49□□□□□ -2.33
CDH23Q9H251 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.49□□□□□ -2.33
CDH23Q9H251 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.48□□□□□ -2.33
CDH23Q9H251 AC113368.1-201ENST00000603736 382 ntBASIC0.48□□□□□ -2.33
CDH23Q9H251 RNU6-1305P-201ENST00000364353 104 ntBASIC0.48□□□□□ -2.33
CDH23Q9H251 MTCO1P56-201ENST00000401674 224 ntBASIC0.48□□□□□ -2.33
CDH23Q9H251 RNU2-37P-201ENST00000410695 177 ntBASIC0.48□□□□□ -2.33
CDH23Q9H251 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.48□□□□□ -2.33
CDH23Q9H251 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CDH23Q9H251 AL136313.1-201ENST00000624804 202 ntBASIC0.48□□□□□ -2.33
CDH23Q9H251 MIR5087-201ENST00000635826 76 ntBASIC0.48□□□□□ -2.33
CDH23Q9H251 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CDH23Q9H251 SNORD56-201ENST00000413522 71 ntBASIC0.48□□□□□ -2.33
CDH23Q9H251 OR6C72P-201ENST00000451403 892 ntBASIC0.48□□□□□ -2.33
CDH23Q9H251 AC136932.1-201ENST00000574771 208 ntBASIC0.48□□□□□ -2.33
CDH23Q9H251 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
CDH23Q9H251 RNU6-1181P-201ENST00000384191 106 ntBASIC0.47□□□□□ -2.33
CDH23Q9H251 SNORA8.3-201ENST00000384679 139 ntBASIC0.47□□□□□ -2.33
CDH23Q9H251 MED14P1-201ENST00000430517 648 ntBASIC0.47□□□□□ -2.33
CDH23Q9H251 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.47□□□□□ -2.33
CDH23Q9H251 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.47□□□□□ -2.33
CDH23Q9H251 uc_338.14-201ENST00000613162 166 ntBASIC0.47□□□□□ -2.33
CDH23Q9H251 RNU6-185P-201ENST00000384421 107 ntBASIC0.47□□□□□ -2.33
CDH23Q9H251 AC244453.4-201ENST00000419150 388 ntBASIC0.47□□□□□ -2.33
CDH23Q9H251 AC246680.2-201ENST00000422106 389 ntBASIC0.47□□□□□ -2.33
CDH23Q9H251 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.47□□□□□ -2.33
CDH23Q9H251 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.47□□□□□ -2.33
CDH23Q9H251 SNRPGP12-201ENST00000449481 213 ntBASIC0.47□□□□□ -2.33
CDH23Q9H251 MTND4LP3-201ENST00000468320 276 ntBASIC0.47□□□□□ -2.33
CDH23Q9H251 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC0.47□□□□□ -2.33
CDH23Q9H251 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.47□□□□□ -2.33
CDH23Q9H251 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.47□□□□□ -2.33
CDH23Q9H251 ELOCP5-201ENST00000604924 333 ntBASIC0.47□□□□□ -2.33
CDH23Q9H251 AC073111.2-201ENST00000605657 1075 ntBASIC0.47□□□□□ -2.33
CDH23Q9H251 AC140725.3-201ENST00000616193 880 ntBASIC0.47□□□□□ -2.33
CDH23Q9H251 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
CDH23Q9H251 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC0.46□□□□□ -2.34
CDH23Q9H251 AL606489.2-201ENST00000433886 234 ntBASIC0.46□□□□□ -2.34
CDH23Q9H251 RPS25P9-201ENST00000435591 252 ntBASIC0.46□□□□□ -2.34
CDH23Q9H251 AC010625.1-201ENST00000511296 403 ntBASIC0.46□□□□□ -2.34
CDH23Q9H251 AC084033.1-201ENST00000550830 633 ntBASIC0.46□□□□□ -2.34
CDH23Q9H251 MIR146A-201ENST00000385201 99 ntBASIC0.46□□□□□ -2.34
CDH23Q9H251 U8.14-201ENST00000390843 143 ntBASIC0.46□□□□□ -2.34
CDH23Q9H251 MRPL35P1-201ENST00000404272 572 ntBASIC0.46□□□□□ -2.34
CDH23Q9H251 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms