Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 MTCYBP43-201ENST00000513621 740 ntBASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 AC096725.1-201ENST00000514266 313 ntBASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 RNA5SP320-201ENST00000516263 124 ntBASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 RNA5SP471-201ENST00000516971 106 ntBASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 AC023824.2-201ENST00000566185 400 ntBASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 VN1R82P-201ENST00000601481 356 ntBASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 AL391001.1-201ENST00000602747 715 ntBASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 RPP40P2-201ENST00000603596 712 ntBASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 AL161798.1-201ENST00000604630 131 ntBASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 AL109618.2-201ENST00000605527 211 ntBASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 YPEL5P2-201ENST00000605553 359 ntBASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 AC106052.1-201ENST00000608029 497 ntBASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 AC079416.3-201ENST00000624479 549 ntBASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 AC080128.1-201ENST00000474389 1917 ntBASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SLIRPQ9GZT3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AL596028.1-201ENST00000326971 197 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 RNU6-723P-201ENST00000383973 107 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 RNU6-1083P-201ENST00000384022 107 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 MIR518C-201ENST00000384822 101 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 SEPT2P1-201ENST00000419651 180 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 DNAJA1P2-201ENST00000421360 1197 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 MTCO3P30-201ENST00000426425 670 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AC084290.1-201ENST00000434995 374 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AC018634.1-201ENST00000437554 401 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AL591719.1-201ENST00000444669 744 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 USP9YP25-201ENST00000457708 443 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 SNORA84-201ENST00000459229 133 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 TRBV1-201ENST00000476502 284 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AC055855.1-201ENST00000489563 579 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AC106872.3-201ENST00000495104 446 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 LTV1P1-201ENST00000510683 1237 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 MTATP6P9-201ENST00000515039 680 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AC109329.2-201ENST00000519658 482 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AL391813.1-201ENST00000603098 260 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AC098826.3-201ENST00000603823 466 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 APOOP1-201ENST00000604695 592 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 ATP1B3P1-201ENST00000605365 821 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AC097468.3-201ENST00000607956 456 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AC072039.2-201ENST00000608883 439 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AP000484.1-201ENST00000620067 1252 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AC004520.1-201ENST00000608362 1413 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 AC009487.4-201ENST00000624969 3585 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 MTND4P27-201ENST00000450813 1354 ntBASIC1.98□□□□□ -2.09
SLIRPQ9GZT3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.97□□□□□ -2.09
SLIRPQ9GZT3 RNU6-433P-201ENST00000363216 104 ntBASIC1.97□□□□□ -2.09
SLIRPQ9GZT3 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.97□□□□□ -2.09
SLIRPQ9GZT3 RNA5SP160-201ENST00000364866 120 ntBASIC1.97□□□□□ -2.09
SLIRPQ9GZT3 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SLIRPQ9GZT3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.97□□□□□ -2.09
SLIRPQ9GZT3 RPL35AP12-201ENST00000425362 338 ntBASIC1.97□□□□□ -2.09
SLIRPQ9GZT3 ISCA1P1-201ENST00000426679 387 ntBASIC1.97□□□□□ -2.09
SLIRPQ9GZT3 MICF-203ENST00000432679 129 ntBASIC1.97□□□□□ -2.09
SLIRPQ9GZT3 PGBD4P3-201ENST00000440731 581 ntBASIC1.97□□□□□ -2.09
SLIRPQ9GZT3 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SLIRPQ9GZT3 FABP5P15-201ENST00000453566 214 ntBASIC1.97□□□□□ -2.09
SLIRPQ9GZT3 AC026801.1-201ENST00000497178 464 ntBASIC1.97□□□□□ -2.09
SLIRPQ9GZT3 UBE2V1P12-201ENST00000503954 474 ntBASIC1.97□□□□□ -2.09
SLIRPQ9GZT3 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.97□□□□□ -2.09
SLIRPQ9GZT3 AC008413.1-201ENST00000511864 177 ntBASIC1.97□□□□□ -2.09
SLIRPQ9GZT3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.97□□□□□ -2.09
SLIRPQ9GZT3 SNORA31.3-201ENST00000516029 96 ntBASIC1.97□□□□□ -2.09
SLIRPQ9GZT3 RNU1-103P-201ENST00000516502 125 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms