Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC062029.1-202ENST00000606164 3651 ntBASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 RASSF6-203ENST00000342081 4331 ntAPPRIS P4 TSL 2 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 KIAA1143-201ENST00000296121 5122 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 THNSL1-202ENST00000524413 3788 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
KRTAP4-4Q9BYR3 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 CNIH4-202ENST00000366857 3963 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 USP8P1-201ENST00000494673 3183 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC009831.5-201ENST00000624000 3189 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AL034546.1-201ENST00000623740 3693 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC107398.3-201ENST00000562284 7000 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 ERG-206ENST00000398911 4914 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 STON2-201ENST00000267540 2977 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AF254983.1-201ENST00000612267 3336 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RNU1-21P-201ENST00000363327 163 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RNU6-645P-201ENST00000364649 106 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RN7SKP50-201ENST00000364694 315 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 SNORD1A-201ENST00000364968 72 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RNU1-140P-201ENST00000365040 165 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RNA5SP442-201ENST00000365050 107 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RNA5-8SP4-201ENST00000365096 150 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 LST1-211ENST00000376110 433 ntTSL 3 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 SNORA30-201ENST00000384028 129 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 SNORA67.2-201ENST00000384300 149 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RNU6-1031P-201ENST00000384773 107 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 MIR23A-201ENST00000385245 73 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 MIR548B-201ENST00000385247 97 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 MIR325-201ENST00000385260 98 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 SNORD113-2-201ENST00000391082 72 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 SNORA57.2-201ENST00000391265 128 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 U3.38-201ENST00000408534 216 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RNU6-57P-201ENST00000411348 103 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC023141.10-201ENST00000415634 200 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC079355.1-201ENST00000421770 223 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC244098.3-201ENST00000424803 96 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 CYP4F25P-201ENST00000446871 520 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC097463.1-201ENST00000447288 481 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC087499.4-201ENST00000448505 178 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 AC093166.3-201ENST00000448785 303 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RNU6-221P-201ENST00000459541 99 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RNU6-274P-201ENST00000459566 107 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RN7SL213P-201ENST00000463482 317 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RN7SKP241-201ENST00000464584 291 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 SNRPGP7-201ENST00000469016 106 ntBASIC1.43□□□□□ -2.18
KRTAP4-4Q9BYR3 RN7SL414P-201ENST00000469545 294 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms