Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.88□□□□□ -1.79
CHMP4AQ9BY43 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.88□□□□□ -1.79
CHMP4AQ9BY43 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHMP4AQ9BY43 BNIP3P9-201ENST00000603714 553 ntBASIC3.88□□□□□ -1.79
CHMP4AQ9BY43 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.88□□□□□ -1.79
CHMP4AQ9BY43 AC010678.1-201ENST00000614118 713 ntBASIC3.88□□□□□ -1.79
CHMP4AQ9BY43 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 NACAP2-201ENST00000318548 624 ntBASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 Y_RNA.46-201ENST00000362695 102 ntBASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 U8.14-201ENST00000390843 143 ntBASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 SNORA48.2-201ENST00000390926 124 ntBASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 AC022018.1-201ENST00000430685 241 ntBASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 RPL36AP6-201ENST00000435770 321 ntBASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 BRK1P2-201ENST00000442875 223 ntBASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 RPS3AP14-201ENST00000483907 780 ntBASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 RNU2-10P-201ENST00000516375 211 ntBASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 AP006587.4-201ENST00000526053 529 ntBASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 AL139418.1-201ENST00000613613 177 ntBASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 AL136313.1-201ENST00000624804 202 ntBASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CHMP4AQ9BY43 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 SNORA38-201ENST00000363946 132 ntBASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 RNU6-1200P-201ENST00000384162 107 ntBASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 SNORA54-201ENST00000384281 123 ntBASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 SNORD67-201ENST00000390833 111 ntBASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 AC098592.1-201ENST00000419352 333 ntBASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 RPS24P13-201ENST00000442520 397 ntBASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 AC125238.1-201ENST00000448842 249 ntBASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 AC003071.1-201ENST00000451219 789 ntBASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 SCARNA3-201ENST00000517097 143 ntBASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 AC009812.2-201ENST00000517657 457 ntBASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 AC022080.3-201ENST00000544433 482 ntBASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 AL359999.1-201ENST00000604513 294 ntBASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 AC013244.3-201ENST00000605614 388 ntBASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 AC107952.2-201ENST00000606048 486 ntBASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 AC021755.4-201ENST00000616620 456 ntBASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 AC009159.1-201ENST00000618386 642 ntBASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.86□□□□□ -1.79
CHMP4AQ9BY43 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CHMP4AQ9BY43 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.85□□□□□ -1.79
CHMP4AQ9BY43 AC119751.3-201ENST00000399720 670 ntBASIC3.85□□□□□ -1.79
CHMP4AQ9BY43 RSL24D1P4-201ENST00000400938 484 ntBASIC3.85□□□□□ -1.79
CHMP4AQ9BY43 RNA5SP293-201ENST00000410527 113 ntBASIC3.85□□□□□ -1.79
CHMP4AQ9BY43 AC078974.1-201ENST00000411597 223 ntBASIC3.85□□□□□ -1.79
CHMP4AQ9BY43 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.85□□□□□ -1.79
CHMP4AQ9BY43 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.85□□□□□ -1.79
CHMP4AQ9BY43 AC117440.1-201ENST00000474107 571 ntBASIC3.85□□□□□ -1.79
CHMP4AQ9BY43 AC072039.1-201ENST00000477611 581 ntBASIC3.85□□□□□ -1.79
CHMP4AQ9BY43 RPL22P13-201ENST00000493291 347 ntBASIC3.85□□□□□ -1.79
CHMP4AQ9BY43 AC112204.1-201ENST00000502591 103 ntBASIC3.85□□□□□ -1.79
CHMP4AQ9BY43 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CHMP4AQ9BY43 AC023141.11-201ENST00000508864 202 ntBASIC3.85□□□□□ -1.79
CHMP4AQ9BY43 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.85□□□□□ -1.79
CHMP4AQ9BY43 AC006199.1-201ENST00000548728 219 ntBASIC3.85□□□□□ -1.79
CHMP4AQ9BY43 PCMTD1P2-201ENST00000565017 355 ntBASIC3.85□□□□□ -1.79
CHMP4AQ9BY43 AC080128.1-201ENST00000474389 1917 ntBASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 RNU6-512P-201ENST00000364438 103 ntBASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 SNORA9.2-201ENST00000365361 133 ntBASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 RNU6-658P-201ENST00000384606 106 ntBASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 PTGES3P4-201ENST00000426243 356 ntBASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 RPL22P17-201ENST00000438729 315 ntBASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 AL161651.1-201ENST00000440882 223 ntBASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 AL606662.1-201ENST00000445763 553 ntBASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 MTND1P12-201ENST00000455231 147 ntBASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 RN7SL499P-201ENST00000481141 276 ntBASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 EIF4EP3-201ENST00000498782 656 ntBASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 RNA5SP112-201ENST00000515937 99 ntBASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 RNU6-677P-201ENST00000516914 101 ntBASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 AL365204.3-201ENST00000612448 685 ntBASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 FO624990.1-201ENST00000636373 85 ntBASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 MTND4P16-201ENST00000466108 1367 ntBASIC3.84□□□□□ -1.79
CHMP4AQ9BY43 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
CHMP4AQ9BY43 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
CHMP4AQ9BY43 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CHMP4AQ9BY43 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms