Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 AL049838.1-201ENST00000563647 981 ntBASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 AC007151.1-201ENST00000572774 483 ntBASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 AC090615.1-201ENST00000577519 154 ntBASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 AL391813.1-201ENST00000603098 260 ntBASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 AC069294.1-201ENST00000608397 350 ntBASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 U4atac.1-201ENST00000618345 95 ntBASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 AC093875.1-201ENST00000623688 504 ntBASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 HSPA8P4-201ENST00000511877 1920 ntBASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 AL359851.1-201ENST00000569460 4997 ntBASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 RNU6-884P-201ENST00000363889 107 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 Y_RNA.548-201ENST00000384656 105 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 CIR1P3-201ENST00000405137 479 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 AL109913.1-201ENST00000421173 514 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 HMGN2P19-201ENST00000425149 265 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 AC007919.1-201ENST00000429380 217 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 AL451074.3-201ENST00000437709 472 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 AC096638.1-201ENST00000444678 216 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 AC055731.1-201ENST00000474387 401 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 AC068781.1-201ENST00000488231 618 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 RPS29P21-201ENST00000496272 170 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 AC026801.1-201ENST00000497178 464 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 AC096571.1-202ENST00000506634 735 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 SNORA31.25-201ENST00000517242 134 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 MIR4637-201ENST00000582405 84 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 VN1R87P-201ENST00000596706 487 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 AL590099.1-201ENST00000615276 138 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 AC002550.2-201ENST00000621246 394 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 AL157770.1-201ENST00000623049 439 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 MIR219B-201ENST00000637023 88 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.8□□□□□ -2.12
CDCA4Q9BXL8 AC110491.1-201ENST00000562191 2010 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 RNU1-148P-201ENST00000384472 162 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 U6atac.2-201ENST00000408644 118 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 TPMTP3-201ENST00000411928 735 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 NDUFS5P4-201ENST00000412983 318 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 BPY2DP-201ENST00000422208 265 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 AC092634.2-201ENST00000428146 1010 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 AC093106.2-201ENST00000428212 385 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 AC027124.2-201ENST00000428249 105 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 MTCO1P3-201ENST00000429327 192 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 SEPT7P5-201ENST00000434048 306 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 AC004383.1-201ENST00000438135 289 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 SDCBPP1-201ENST00000440192 890 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 AL121769.1-201ENST00000469473 401 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 YWHAEP4-201ENST00000505390 198 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 LTV1P1-201ENST00000510683 1237 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 SNORA31.6-201ENST00000516241 130 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 RNU2-19P-201ENST00000517288 84 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 IGKV3-31-201ENST00000523109 329 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 AC007229.1-201ENST00000590455 412 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 AC008749.1-201ENST00000597650 306 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 AL158211.4-201ENST00000606988 584 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 AL603758.1-201ENST00000618654 241 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 AC253576.2-201ENST00000618815 580 ntBASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.79□□□□□ -2.12
CDCA4Q9BXL8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CDCA4Q9BXL8 AL356473.1-201ENST00000406203 1408 ntBASIC1.78□□□□□ -2.12
CDCA4Q9BXL8 RNU6-216P-201ENST00000363282 104 ntBASIC1.78□□□□□ -2.12
CDCA4Q9BXL8 RNU5E-8P-201ENST00000363502 116 ntBASIC1.78□□□□□ -2.12
CDCA4Q9BXL8 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CDCA4Q9BXL8 AL603865.2-201ENST00000401679 213 ntBASIC1.78□□□□□ -2.12
CDCA4Q9BXL8 RN7SKP158-201ENST00000410453 326 ntBASIC1.78□□□□□ -2.12
CDCA4Q9BXL8 BTF3P8-201ENST00000414577 526 ntBASIC1.78□□□□□ -2.12
CDCA4Q9BXL8 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.78□□□□□ -2.12
CDCA4Q9BXL8 RPS3AP44-201ENST00000425466 790 ntBASIC1.78□□□□□ -2.12
CDCA4Q9BXL8 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.78□□□□□ -2.12
CDCA4Q9BXL8 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.78□□□□□ -2.12
CDCA4Q9BXL8 AL121890.1-201ENST00000435457 205 ntBASIC1.78□□□□□ -2.12
CDCA4Q9BXL8 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.78□□□□□ -2.12
CDCA4Q9BXL8 AC079776.3-201ENST00000450665 370 ntBASIC1.78□□□□□ -2.12
CDCA4Q9BXL8 RPS29P20-201ENST00000489592 171 ntBASIC1.78□□□□□ -2.12
CDCA4Q9BXL8 AC026414.1-201ENST00000504046 698 ntBASIC1.78□□□□□ -2.12
CDCA4Q9BXL8 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 10.4 ms