Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AL162713.1-201ENST00000604480 262 ntBASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 AC007619.2-201ENST00000605743 379 ntBASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 AC022149.2-201ENST00000621061 203 ntBASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 FER-210ENST00000628534 558 ntTSL 5 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
PAAF1Q9BRP4 AC093536.2-201ENST00000565257 1406 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 MFSD8-233ENST00000641482 4860 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 Y_RNA.38-201ENST00000362617 102 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 RNU6-288P-201ENST00000363690 104 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 SNORA38.1-201ENST00000364172 131 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 Y_RNA.255-201ENST00000364581 97 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 RNU6-534P-201ENST00000364877 106 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 DEFB109C-201ENST00000382575 264 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 DEFB109B-201ENST00000382656 264 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 RNU6-1029P-201ENST00000384109 107 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 RNU6-190P-201ENST00000384154 102 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 MIR3074-201ENST00000384885 81 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 MIR128-1-201ENST00000384921 82 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 AL357075.1-201ENST00000404107 726 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 AL451054.2-201ENST00000420896 202 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 MTCYBP8-201ENST00000422855 651 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 GTF2IP20-201ENST00000431663 360 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 RBMX2P4-201ENST00000441256 376 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 RPS29P31-201ENST00000446147 164 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 AL163973.1-201ENST00000484753 577 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 AC104806.1-201ENST00000508720 308 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 SNORA70.16-201ENST00000516390 95 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 RNU6-1256P-201ENST00000516539 103 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 RN7SKP60-201ENST00000516985 239 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 NRON-201ENST00000517270 370 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 AC090281.1-201ENST00000523019 276 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 OR5B19P-201ENST00000531766 928 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 ADI1P3-201ENST00000549509 470 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 AC007424.1-203ENST00000554613 687 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 AL121576.1-201ENST00000556055 276 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 MIR5680-201ENST00000577577 84 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 AC048347.1-201ENST00000624621 427 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 AC006020.1-201ENST00000420179 1854 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 MTND4P14-201ENST00000435799 1354 ntBASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PAAF1Q9BRP4 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 RNU6-1283P-201ENST00000365314 105 ntBASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 RNU6-61P-201ENST00000365528 109 ntBASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 RNU1-89P-201ENST00000384592 164 ntBASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 RNU6-387P-201ENST00000411331 105 ntBASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 RNA5SP111-201ENST00000411386 101 ntBASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 AL353572.1-201ENST00000442490 417 ntBASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 RPS4XP13-201ENST00000483219 789 ntBASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 RANP3-201ENST00000530970 276 ntBASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 MIR4775-201ENST00000581168 75 ntBASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 AC011471.1-201ENST00000585766 187 ntBASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 AC020914.4-201ENST00000597690 277 ntBASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 AL670379.4-201ENST00000605279 254 ntBASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 AL160281.1-201ENST00000605307 311 ntBASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 AL365204.3-201ENST00000612448 685 ntBASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 MIR3662-201ENST00000637030 95 ntBASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
PAAF1Q9BRP4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 Z83843.1-201ENST00000604070 3685 ntBASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.6□□□□□ -1.83
PAAF1Q9BRP4 RNA5SP374-201ENST00000362939 125 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms