Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 HMGB1P12-201ENST00000438594 598 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 HMGB3P11-201ENST00000440127 604 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 AL360271.2-201ENST00000447710 161 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 RPL30P5-201ENST00000494923 336 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.77□□□□□ -1.81
VRK1Q99986 AC008716.1-201ENST00000511084 513 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 Y_RNA.675-201ENST00000516389 149 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.77□□□□□ -1.81
VRK1Q99986 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.77□□□□□ -1.81
VRK1Q99986 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.77□□□□□ -1.81
VRK1Q99986 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.77□□□□□ -1.81
VRK1Q99986 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC3.77□□□□□ -1.81
VRK1Q99986 MIR3942-201ENST00000585264 109 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 AC093227.2-201ENST00000589357 285 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 AC007687.1-201ENST00000602704 304 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 AC113403.1-201ENST00000604910 193 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 ATP1B3P1-201ENST00000605365 821 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 AC128687.2-201ENST00000609657 566 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 uc_338.13-201ENST00000618243 179 ntBASIC3.77□□□□□ -1.81
VRK1Q99986 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.77□□□□□ -1.81
VRK1Q99986 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VRK1Q99986 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.77□□□□□ -1.81
VRK1Q99986 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VRK1Q99986 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
VRK1Q99986 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
VRK1Q99986 AP001486.2-201ENST00000561652 5113 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.76□□□□□ -1.81
VRK1Q99986 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.76□□□□□ -1.81
VRK1Q99986 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VRK1Q99986 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VRK1Q99986 AC125257.1-201ENST00000560400 2930 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VRK1Q99986 RNU4-79P-201ENST00000362764 141 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 RNU6-395P-201ENST00000365662 106 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 RNU1-63P-201ENST00000383902 164 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 Y_RNA.474-201ENST00000384341 102 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 MIR578-201ENST00000384828 96 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 MIR493-201ENST00000385254 89 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 U3.42-201ENST00000408746 214 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 RNU2-37P-201ENST00000410695 177 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 RPL23AP26-201ENST00000412728 464 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 RBMY1KP-201ENST00000423480 476 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 AC007919.1-201ENST00000429380 217 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 NDUFB4P6-201ENST00000436819 366 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 Z82210.1-201ENST00000440037 231 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 HSFY6P-201ENST00000445573 403 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.76□□□□□ -1.81
VRK1Q99986 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 KC877373.1-201ENST00000479066 408 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 RPS4XP13-201ENST00000483219 789 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 AC017037.1-201ENST00000508460 471 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 RNU6-256P-201ENST00000516747 97 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
VRK1Q99986 TVP23BP1-201ENST00000557500 617 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 AC073539.2-201ENST00000597113 165 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 AC010201.1-201ENST00000605051 540 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 uc_338.15-201ENST00000615470 191 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.76□□□□□ -1.81
VRK1Q99986 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.76□□□□□ -1.81
VRK1Q99986 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.76□□□□□ -1.81
VRK1Q99986 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.76□□□□□ -1.81
VRK1Q99986 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VRK1Q99986 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
VRK1Q99986 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.76□□□□□ -1.81
VRK1Q99986 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.76□□□□□ -1.81
VRK1Q99986 AL133383.2-201ENST00000622958 2336 ntBASIC3.76□□□□□ -1.81
VRK1Q99986 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VRK1Q99986 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VRK1Q99986 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
VRK1Q99986 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VRK1Q99986 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VRK1Q99986 RNA5SP388-201ENST00000362584 119 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 Y_RNA.33-201ENST00000362591 102 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VRK1Q99986 MIR3065-201ENST00000390137 79 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 RPS26P8-201ENST00000393490 348 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 RPS4XP7-201ENST00000406274 780 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 RNA5SP306-201ENST00000411087 107 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 SNORA74C-2-201ENST00000411179 201 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 RNU6-607P-201ENST00000411283 108 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 RPS20P15-201ENST00000412792 311 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 AL353621.1-201ENST00000418219 243 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 AL139095.3-201ENST00000419672 1203 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.75□□□□□ -1.81
VRK1Q99986 AC017083.1-201ENST00000428093 483 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 AC004975.1-201ENST00000428733 208 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.75□□□□□ -1.81
VRK1Q99986 PIGFP3-201ENST00000441918 722 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VRK1Q99986 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VRK1Q99986 DHFRP3-201ENST00000455595 559 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 UQCRHP4-201ENST00000471686 272 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 RPL7P43-201ENST00000478876 753 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 RN7SL812P-201ENST00000493791 279 ntBASIC3.75□□□□□ -1.81
VRK1Q99986 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.75□□□□□ -1.81
VRK1Q99986 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.75□□□□□ -1.81
VRK1Q99986 SNORA70.14-201ENST00000516205 110 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms