Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RPS4XP5-202ENST00000449995 1334 ntBASIC3.87□□□□□ -1.79
SMOQ99835 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SMOQ99835 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.87□□□□□ -1.79
SMOQ99835 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMOQ99835 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SMOQ99835 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SMOQ99835 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.86□□□□□ -1.79
SMOQ99835 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
SMOQ99835 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
SMOQ99835 AC007823.1-201ENST00000569932 1566 ntBASIC3.86□□□□□ -1.79
SMOQ99835 RNU4-79P-201ENST00000362764 141 ntBASIC3.86□□□□□ -1.79
SMOQ99835 Y_RNA.58-201ENST00000362807 102 ntBASIC3.86□□□□□ -1.79
SMOQ99835 Y_RNA.100-201ENST00000363141 102 ntBASIC3.86□□□□□ -1.79
SMOQ99835 Y_RNA.154-201ENST00000363624 102 ntBASIC3.86□□□□□ -1.79
SMOQ99835 RNY3P1-201ENST00000365085 102 ntBASIC3.86□□□□□ -1.79
SMOQ99835 RNY3-201ENST00000365484 102 ntBASIC3.86□□□□□ -1.79
SMOQ99835 Y_RNA.490-201ENST00000384413 102 ntBASIC3.86□□□□□ -1.79
SMOQ99835 MIR200C-201ENST00000384980 68 ntBASIC3.86□□□□□ -1.79
SMOQ99835 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMOQ99835 AL592114.1-201ENST00000403842 483 ntBASIC3.86□□□□□ -1.79
SMOQ99835 RN7SKP177-201ENST00000410567 355 ntBASIC3.86□□□□□ -1.79
SMOQ99835 HSPE1P1-201ENST00000421494 318 ntBASIC3.86□□□□□ -1.79
SMOQ99835 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.86□□□□□ -1.79
SMOQ99835 RPS3AP46-201ENST00000448352 682 ntBASIC3.86□□□□□ -1.79
SMOQ99835 AL451050.1-201ENST00000450126 415 ntBASIC3.86□□□□□ -1.79
SMOQ99835 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.86□□□□□ -1.79
SMOQ99835 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.86□□□□□ -1.79
SMOQ99835 RNU7-66P-201ENST00000459469 62 ntBASIC3.86□□□□□ -1.79
SMOQ99835 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.86□□□□□ -1.79
SMOQ99835 HMGB1P22-201ENST00000505315 124 ntBASIC3.86□□□□□ -1.79
SMOQ99835 BTF3L4P4-201ENST00000506381 449 ntBASIC3.86□□□□□ -1.79
SMOQ99835 KLHL2P1-201ENST00000508691 521 ntBASIC3.86□□□□□ -1.79
SMOQ99835 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.86□□□□□ -1.79
SMOQ99835 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.86□□□□□ -1.79
SMOQ99835 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.86□□□□□ -1.79
SMOQ99835 RN7SKP209-201ENST00000516888 304 ntBASIC3.86□□□□□ -1.79
SMOQ99835 RN7SKP256-201ENST00000517201 314 ntBASIC3.86□□□□□ -1.79
SMOQ99835 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.86□□□□□ -1.79
SMOQ99835 RANP3-201ENST00000530970 276 ntBASIC3.86□□□□□ -1.79
SMOQ99835 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.86□□□□□ -1.79
SMOQ99835 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.86□□□□□ -1.79
SMOQ99835 AL355375.2-201ENST00000574825 175 ntBASIC3.86□□□□□ -1.79
SMOQ99835 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.86□□□□□ -1.79
SMOQ99835 AC044792.1-201ENST00000593294 196 ntBASIC3.86□□□□□ -1.79
SMOQ99835 BNIP3P25-201ENST00000596023 559 ntBASIC3.86□□□□□ -1.79
SMOQ99835 AL158032.1-201ENST00000605401 106 ntBASIC3.86□□□□□ -1.79
SMOQ99835 SNORA51-201ENST00000606420 132 ntBASIC3.86□□□□□ -1.79
SMOQ99835 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.86□□□□□ -1.79
SMOQ99835 AL365204.3-201ENST00000612448 685 ntBASIC3.86□□□□□ -1.79
SMOQ99835 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.86□□□□□ -1.79
SMOQ99835 C2orf27A-204ENST00000623058 969 ntBASIC3.86□□□□□ -1.79
SMOQ99835 MIR1302-1-201ENST00000637932 143 ntBASIC3.86□□□□□ -1.79
SMOQ99835 AC009093.8-201ENST00000641769 292 ntBASIC3.86□□□□□ -1.79
SMOQ99835 AC103710.2-202ENST00000641454 2853 ntBASIC3.86□□□□□ -1.79
SMOQ99835 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SMOQ99835 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMOQ99835 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMOQ99835 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SMOQ99835 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.85□□□□□ -1.79
SMOQ99835 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SMOQ99835 SNORD9-201ENST00000362566 104 ntBASIC3.85□□□□□ -1.79
SMOQ99835 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.85□□□□□ -1.79
SMOQ99835 RNU6-1127P-201ENST00000384580 107 ntBASIC3.85□□□□□ -1.79
SMOQ99835 MIR1183-201ENST00000408856 89 ntBASIC3.85□□□□□ -1.79
SMOQ99835 AL451054.2-201ENST00000420896 202 ntBASIC3.85□□□□□ -1.79
SMOQ99835 HMGB1P18-201ENST00000438801 619 ntBASIC3.85□□□□□ -1.79
SMOQ99835 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.85□□□□□ -1.79
SMOQ99835 HMGN2P21-201ENST00000447764 270 ntBASIC3.85□□□□□ -1.79
SMOQ99835 SNRPGP5-201ENST00000456003 220 ntBASIC3.85□□□□□ -1.79
SMOQ99835 AC004801.2-202ENST00000463559 283 ntBASIC3.85□□□□□ -1.79
SMOQ99835 AC010285.1-201ENST00000470580 392 ntBASIC3.85□□□□□ -1.79
SMOQ99835 RPL21P93-201ENST00000480465 489 ntBASIC3.85□□□□□ -1.79
SMOQ99835 AC106707.2-201ENST00000484182 374 ntBASIC3.85□□□□□ -1.79
SMOQ99835 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.85□□□□□ -1.79
SMOQ99835 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.85□□□□□ -1.79
SMOQ99835 Y_RNA.689-201ENST00000516589 107 ntBASIC3.85□□□□□ -1.79
SMOQ99835 RNU6-1153P-201ENST00000516760 105 ntBASIC3.85□□□□□ -1.79
SMOQ99835 RN7SKP258-201ENST00000517151 304 ntBASIC3.85□□□□□ -1.79
SMOQ99835 AP001804.3-201ENST00000525146 880 ntBASIC3.85□□□□□ -1.79
SMOQ99835 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.85□□□□□ -1.79
SMOQ99835 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.85□□□□□ -1.79
SMOQ99835 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.85□□□□□ -1.79
SMOQ99835 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.85□□□□□ -1.79
SMOQ99835 AC005668.1-201ENST00000571142 476 ntBASIC3.85□□□□□ -1.79
SMOQ99835 FAM60BP-201ENST00000578364 658 ntBASIC3.85□□□□□ -1.79
SMOQ99835 AC005498.1-201ENST00000592125 465 ntBASIC3.85□□□□□ -1.79
SMOQ99835 AL670379.4-201ENST00000605279 254 ntBASIC3.85□□□□□ -1.79
SMOQ99835 DUSP12P1-201ENST00000612874 516 ntBASIC3.85□□□□□ -1.79
SMOQ99835 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.85□□□□□ -1.79
SMOQ99835 MIR4727-201ENST00000622232 55 ntBASIC3.85□□□□□ -1.79
SMOQ99835 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.85□□□□□ -1.79
SMOQ99835 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SMOQ99835 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SMOQ99835 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
SMOQ99835 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.85□□□□□ -1.79
SMOQ99835 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.85□□□□□ -1.79
SMOQ99835 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SMOQ99835 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SMOQ99835 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
SMOQ99835 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms