Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.63□□□□□ -1.99
LITAFQ99732 RPL27AP8-201ENST00000424277 446 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 SKA2P1-201ENST00000425592 390 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 RPL21P66-201ENST00000426566 466 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 AL356867.1-201ENST00000429623 299 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 AL162591.2-201ENST00000449634 317 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.63□□□□□ -1.99
LITAFQ99732 RNA5SP246-201ENST00000458909 119 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 RPL23AP14-201ENST00000468281 468 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 AC104472.2-201ENST00000469035 601 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 RPL21P126-201ENST00000470049 478 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 RPS20P22-201ENST00000473700 357 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 AC083982.1-201ENST00000485679 344 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC2.63□□□□□ -1.99
LITAFQ99732 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.63□□□□□ -1.99
LITAFQ99732 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC2.63□□□□□ -1.99
LITAFQ99732 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC2.63□□□□□ -1.99
LITAFQ99732 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.63□□□□□ -1.99
LITAFQ99732 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.63□□□□□ -1.99
LITAFQ99732 SNORA70.16-201ENST00000516390 95 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 RNA5SP519-201ENST00000516480 119 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 RNU6-143P-201ENST00000516942 93 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 RNU6-323P-201ENST00000521915 107 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LITAFQ99732 AP003072.1-201ENST00000531740 145 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 APOOP3-201ENST00000536787 586 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 AC004024.1-201ENST00000549244 247 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.63□□□□□ -1.99
LITAFQ99732 IMMP1LP2-201ENST00000552954 492 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.63□□□□□ -1.99
LITAFQ99732 AC006270.2-201ENST00000578523 652 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 MIR548AC-201ENST00000585049 88 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 AC022432.1-201ENST00000595739 310 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 AC107294.1-201ENST00000609524 467 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.63□□□□□ -1.99
LITAFQ99732 AC084781.2-201ENST00000615568 161 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 AC090132.2-201ENST00000615881 347 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 AL355365.1-201ENST00000616480 294 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 AC090971.5-201ENST00000621102 293 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 AC112200.1-201ENST00000625015 234 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC2.63□□□□□ -1.99
LITAFQ99732 AL512643.1-201ENST00000635735 524 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 MIR1910-201ENST00000636955 80 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 SDAD1P1-202ENST00000524156 2051 ntBASIC2.63□□□□□ -1.99
LITAFQ99732 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.63□□□□□ -1.99
LITAFQ99732 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LITAFQ99732 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
LITAFQ99732 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
LITAFQ99732 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC2.63□□□□□ -1.99
LITAFQ99732 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LITAFQ99732 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
LITAFQ99732 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
LITAFQ99732 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LITAFQ99732 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LITAFQ99732 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
LITAFQ99732 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC2.62□□□□□ -1.99
LITAFQ99732 RNU6-562P-201ENST00000362731 107 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 SNORD113.2-201ENST00000364166 89 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 RNU6-128P-201ENST00000383976 107 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 Y_RNA.480-201ENST00000384364 102 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 MIR607-201ENST00000385241 96 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 AL590004.1-201ENST00000405321 300 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 MIR1290-201ENST00000408735 78 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 RN7SKP106-201ENST00000410832 272 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 RNU6-370P-201ENST00000411008 104 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.62□□□□□ -1.99
LITAFQ99732 AL353729.1-201ENST00000425044 720 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.62□□□□□ -1.99
LITAFQ99732 FGF12-202ENST00000430714 603 ntTSL 2 BASIC2.62□□□□□ -1.99
LITAFQ99732 SNAP23P1-201ENST00000433229 246 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC2.62□□□□□ -1.99
LITAFQ99732 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.62□□□□□ -1.99
LITAFQ99732 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.62□□□□□ -1.99
LITAFQ99732 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.62□□□□□ -1.99
LITAFQ99732 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.62□□□□□ -1.99
LITAFQ99732 RNU7-170P-201ENST00000459303 61 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 RPL12P20-201ENST00000475538 479 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 RPL31P60-201ENST00000478450 367 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 RN7SL691P-201ENST00000494487 301 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 HMGB3P15-201ENST00000507326 574 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 AC020593.1-201ENST00000507399 299 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.62□□□□□ -1.99
LITAFQ99732 MTND3P25-201ENST00000509243 135 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC2.62□□□□□ -1.99
LITAFQ99732 RNU6-1170P-201ENST00000515974 106 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 RNU6-1332P-201ENST00000516666 104 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 RNU6-1315P-201ENST00000517187 99 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC2.62□□□□□ -1.99
LITAFQ99732 EDDM3DP-201ENST00000554692 434 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.62□□□□□ -1.99
LITAFQ99732 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LITAFQ99732 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LITAFQ99732 AC091042.1-201ENST00000579213 173 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 AC069061.3-201ENST00000582254 823 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 MIR4737-201ENST00000583979 81 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 AC005034.5-201ENST00000604219 466 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 AC002044.1-201ENST00000606707 158 ntBASIC2.62□□□□□ -1.99
LITAFQ99732 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.62□□□□□ -1.99
LITAFQ99732 Y_RNA.812-201ENST00000610788 101 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms