Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 PMCHL2-203ENST00000457791 237 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.68□□□□□ -2.3
COL12A1Q99715 AL138976.2-201ENST00000563989 694 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.68□□□□□ -2.3
COL12A1Q99715 AC022387.2-201ENST00000604050 448 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
COL12A1Q99715 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.68□□□□□ -2.3
COL12A1Q99715 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.68□□□□□ -2.3
COL12A1Q99715 AL022238.1-201ENST00000442557 355 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 AC005908.1-201ENST00000468701 347 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 Y_RNA.700-201ENST00000516806 100 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 IGHVIII-38-1-201ENST00000521454 282 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.68□□□□□ -2.3
COL12A1Q99715 AC090953.1-201ENST00000604305 1092 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 SNORD114-2-201ENST00000363953 78 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 FO393413.1-201ENST00000402892 195 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 AC096533.1-201ENST00000411645 353 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 AC022880.1-201ENST00000534017 973 ntBASIC0.68□□□□□ -2.3
COL12A1Q99715 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.68□□□□□ -2.3
COL12A1Q99715 RNA5SP347-201ENST00000362445 119 ntBASIC0.67□□□□□ -2.3
COL12A1Q99715 AL022718.1-201ENST00000412004 84 ntBASIC0.67□□□□□ -2.3
COL12A1Q99715 AC004022.2-201ENST00000413824 193 ntBASIC0.67□□□□□ -2.3
COL12A1Q99715 AL031663.1-201ENST00000437445 219 ntBASIC0.67□□□□□ -2.3
COL12A1Q99715 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC0.67□□□□□ -2.3
COL12A1Q99715 RPS27P21-201ENST00000486977 252 ntBASIC0.67□□□□□ -2.3
COL12A1Q99715 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.67□□□□□ -2.3
COL12A1Q99715 Y_RNA.757-201ENST00000578934 114 ntBASIC0.67□□□□□ -2.3
COL12A1Q99715 AC022662.1-201ENST00000580252 331 ntBASIC0.67□□□□□ -2.3
COL12A1Q99715 AC103810.9-201ENST00000606688 112 ntBASIC0.67□□□□□ -2.3
COL12A1Q99715 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
COL12A1Q99715 ZNF702P-202ENST00000434269 1966 ntBASIC0.67□□□□□ -2.3
COL12A1Q99715 AC009812.4-201ENST00000569134 1805 ntBASIC0.67□□□□□ -2.3
COL12A1Q99715 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC0.67□□□□□ -2.3
COL12A1Q99715 Z95118.1-201ENST00000421372 247 ntBASIC0.67□□□□□ -2.3
COL12A1Q99715 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.67□□□□□ -2.3
COL12A1Q99715 PABPC1P3-201ENST00000469174 459 ntBASIC0.67□□□□□ -2.3
COL12A1Q99715 AC117503.1-201ENST00000472241 394 ntBASIC0.67□□□□□ -2.3
COL12A1Q99715 AC105252.1-201ENST00000503089 286 ntBASIC0.67□□□□□ -2.3
COL12A1Q99715 HMGB3P3-201ENST00000510526 400 ntBASIC0.67□□□□□ -2.3
COL12A1Q99715 SNORA31.25-201ENST00000517242 134 ntBASIC0.67□□□□□ -2.3
COL12A1Q99715 AP006248.3-201ENST00000623580 594 ntBASIC0.67□□□□□ -2.3
COL12A1Q99715 AL591034.1-201ENST00000407447 340 ntBASIC0.66□□□□□ -2.3
COL12A1Q99715 UBBP3-201ENST00000445497 241 ntBASIC0.66□□□□□ -2.3
COL12A1Q99715 HSPE1P24-201ENST00000450782 238 ntBASIC0.66□□□□□ -2.3
COL12A1Q99715 HMGN1P10-201ENST00000474557 553 ntBASIC0.66□□□□□ -2.3
COL12A1Q99715 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.66□□□□□ -2.3
COL12A1Q99715 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
COL12A1Q99715 AC106052.1-201ENST00000608029 497 ntBASIC0.66□□□□□ -2.3
COL12A1Q99715 AL161734.1-201ENST00000609720 557 ntBASIC0.66□□□□□ -2.3
COL12A1Q99715 AC106028.5-201ENST00000610332 395 ntBASIC0.66□□□□□ -2.3
COL12A1Q99715 uc_338.14-201ENST00000613162 166 ntBASIC0.66□□□□□ -2.3
COL12A1Q99715 AC007275.1-201ENST00000621243 671 ntBASIC0.66□□□□□ -2.3
COL12A1Q99715 AC079597.1-201ENST00000624306 508 ntBASIC0.66□□□□□ -2.3
COL12A1Q99715 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
COL12A1Q99715 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC0.66□□□□□ -2.3
COL12A1Q99715 SMARCE1P4-201ENST00000523647 241 ntBASIC0.66□□□□□ -2.3
COL12A1Q99715 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.66□□□□□ -2.3
COL12A1Q99715 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.66□□□□□ -2.3
COL12A1Q99715 AP000648.3-201ENST00000623539 4507 ntBASIC0.66□□□□□ -2.3
COL12A1Q99715 RNU2-41P-201ENST00000410991 178 ntBASIC0.66□□□□□ -2.3
COL12A1Q99715 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.66□□□□□ -2.3
COL12A1Q99715 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.66□□□□□ -2.3
COL12A1Q99715 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.66□□□□□ -2.3
COL12A1Q99715 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.66□□□□□ -2.3
COL12A1Q99715 NDUFS5P6-201ENST00000529136 295 ntBASIC0.66□□□□□ -2.3
COL12A1Q99715 OR4G2P-201ENST00000328113 903 ntBASIC0.65□□□□□ -2.31
COL12A1Q99715 FTH1P15-201ENST00000406984 280 ntBASIC0.65□□□□□ -2.31
COL12A1Q99715 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
COL12A1Q99715 AL356867.1-201ENST00000429623 299 ntBASIC0.65□□□□□ -2.31
COL12A1Q99715 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.65□□□□□ -2.31
COL12A1Q99715 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.65□□□□□ -2.31
COL12A1Q99715 AC104692.1-201ENST00000472406 90 ntBASIC0.65□□□□□ -2.31
COL12A1Q99715 RNU6-229P-201ENST00000516614 102 ntBASIC0.65□□□□□ -2.31
COL12A1Q99715 AC104997.1-201ENST00000519761 717 ntBASIC0.65□□□□□ -2.31
COL12A1Q99715 SUB1P1-201ENST00000524415 382 ntBASIC0.65□□□□□ -2.31
COL12A1Q99715 AC093510.2-201ENST00000562820 896 ntBASIC0.65□□□□□ -2.31
COL12A1Q99715 RPS20P20-201ENST00000460498 340 ntBASIC0.65□□□□□ -2.31
COL12A1Q99715 RNU6-496P-201ENST00000516145 99 ntBASIC0.65□□□□□ -2.31
COL12A1Q99715 SCARNA1-201ENST00000517138 166 ntBASIC0.65□□□□□ -2.31
COL12A1Q99715 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.65□□□□□ -2.31
COL12A1Q99715 U4.2-201ENST00000618561 85 ntBASIC0.65□□□□□ -2.31
COL12A1Q99715 AC006065.5-201ENST00000623427 349 ntBASIC0.65□□□□□ -2.31
COL12A1Q99715 AC091932.3-201ENST00000624223 323 ntBASIC0.65□□□□□ -2.31
COL12A1Q99715 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
COL12A1Q99715 AL355497.1-201ENST00000406262 551 ntBASIC0.64□□□□□ -2.31
COL12A1Q99715 PTGES3P2-201ENST00000407942 482 ntBASIC0.64□□□□□ -2.31
COL12A1Q99715 VN1R42P-201ENST00000424651 344 ntBASIC0.64□□□□□ -2.31
COL12A1Q99715 HMGB3P10-201ENST00000434734 572 ntBASIC0.64□□□□□ -2.31
COL12A1Q99715 NAP1L1P3-201ENST00000462291 880 ntBASIC0.64□□□□□ -2.31
COL12A1Q99715 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.64□□□□□ -2.31
COL12A1Q99715 MRPS17P9-201ENST00000511924 393 ntBASIC0.64□□□□□ -2.31
COL12A1Q99715 RNU6-347P-201ENST00000516658 105 ntBASIC0.64□□□□□ -2.31
COL12A1Q99715 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.64□□□□□ -2.31
COL12A1Q99715 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.64□□□□□ -2.31
COL12A1Q99715 MIR4514-201ENST00000581410 57 ntBASIC0.64□□□□□ -2.31
COL12A1Q99715 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.64□□□□□ -2.31
COL12A1Q99715 AC009902.3-201ENST00000606235 2172 ntBASIC0.64□□□□□ -2.31
COL12A1Q99715 MTATP6P4-201ENST00000427725 675 ntBASIC0.64□□□□□ -2.31
COL12A1Q99715 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.64□□□□□ -2.31
COL12A1Q99715 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms