Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.16□□□□□ -1.9
RAD9AQ99638 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.16□□□□□ -1.9
RAD9AQ99638 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.16□□□□□ -1.9
RAD9AQ99638 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.16□□□□□ -1.9
RAD9AQ99638 RPL21P5-201ENST00000554662 472 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.16□□□□□ -1.9
RAD9AQ99638 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.16□□□□□ -1.9
RAD9AQ99638 RPL23AP84-201ENST00000571193 464 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 MIR3146-201ENST00000580367 79 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.16□□□□□ -1.9
RAD9AQ99638 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.16□□□□□ -1.9
RAD9AQ99638 SEPT7P9-203ENST00000604116 343 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 RNU6-87P-201ENST00000607561 108 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 AL591516.1-201ENST00000611326 274 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 AC090970.3-201ENST00000612566 866 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 AC008250.2-201ENST00000615261 205 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 AP003122.6-201ENST00000623831 495 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.16□□□□□ -1.9
RAD9AQ99638 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.16□□□□□ -1.9
RAD9AQ99638 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.16□□□□□ -1.9
RAD9AQ99638 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.16□□□□□ -1.9
RAD9AQ99638 FAM35CP-201ENST00000554755 2470 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RAD9AQ99638 MTND5P27-201ENST00000428871 1720 ntBASIC3.16□□□□□ -1.9
RAD9AQ99638 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.15□□□□□ -1.9
RAD9AQ99638 Y_RNA.201-201ENST00000364052 96 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
RAD9AQ99638 RNU6-1027P-201ENST00000383998 107 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 AL360182.1-201ENST00000397433 468 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 TXNP7-201ENST00000406296 293 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 RPS3AP3-201ENST00000411933 242 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 SPA17P1-201ENST00000416656 452 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.15□□□□□ -1.91
RAD9AQ99638 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.15□□□□□ -1.91
RAD9AQ99638 TIMM9P1-201ENST00000436122 256 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 PGBD4P3-201ENST00000440731 581 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 MTCO3P45-201ENST00000443036 613 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.15□□□□□ -1.91
RAD9AQ99638 ELOCP30-201ENST00000447108 299 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 AL590664.1-201ENST00000448065 339 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 AL033528.1-201ENST00000453780 140 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 snoU109.1-201ENST00000459339 135 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 SNORD42A-201ENST00000459584 64 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 AL049714.1-201ENST00000466686 347 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.15□□□□□ -1.91
RAD9AQ99638 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.15□□□□□ -1.91
RAD9AQ99638 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RAD9AQ99638 CDC42P4-201ENST00000510507 563 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 RN7SKP282-201ENST00000516824 299 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.15□□□□□ -1.91
RAD9AQ99638 AC107934.1-201ENST00000522215 217 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.15□□□□□ -1.91
RAD9AQ99638 AP003181.2-201ENST00000528941 181 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.15□□□□□ -1.91
RAD9AQ99638 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.15□□□□□ -1.91
RAD9AQ99638 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.15□□□□□ -1.91
RAD9AQ99638 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.15□□□□□ -1.91
RAD9AQ99638 MIR3118-1-201ENST00000581787 76 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.15□□□□□ -1.91
RAD9AQ99638 HMGN1P30-201ENST00000589286 268 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.15□□□□□ -1.91
RAD9AQ99638 KC877982.1-201ENST00000602313 470 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 AC064872.1-201ENST00000604823 1072 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 AP000254.1-201ENST00000609934 520 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 AC103710.1-201ENST00000610003 901 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 AC245517.5-201ENST00000611529 162 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 AC013476.2-201ENST00000614456 459 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 AC007318.2-201ENST00000620999 243 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.15□□□□□ -1.91
RAD9AQ99638 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
RAD9AQ99638 TEX21P-201ENST00000447107 1476 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 AC004972.1-201ENST00000623934 2209 ntBASIC3.15□□□□□ -1.91
RAD9AQ99638 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RAD9AQ99638 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.14□□□□□ -1.91
RAD9AQ99638 SNORA9.2-201ENST00000365361 133 ntBASIC3.14□□□□□ -1.91
RAD9AQ99638 RNU6-297P-201ENST00000384636 107 ntBASIC3.14□□□□□ -1.91
RAD9AQ99638 SNORA1.3-201ENST00000384676 136 ntBASIC3.14□□□□□ -1.91
RAD9AQ99638 MIR493-201ENST00000385254 89 ntBASIC3.14□□□□□ -1.91
RAD9AQ99638 RNU2-52P-201ENST00000410680 190 ntBASIC3.14□□□□□ -1.91
RAD9AQ99638 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.14□□□□□ -1.91
RAD9AQ99638 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.14□□□□□ -1.91
RAD9AQ99638 NDUFB4P7-201ENST00000423198 363 ntBASIC3.14□□□□□ -1.91
RAD9AQ99638 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.14□□□□□ -1.91
RAD9AQ99638 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.14□□□□□ -1.91
RAD9AQ99638 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.14□□□□□ -1.91
RAD9AQ99638 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.14□□□□□ -1.91
RAD9AQ99638 AL353706.1-201ENST00000436728 494 ntBASIC3.14□□□□□ -1.91
RAD9AQ99638 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.14□□□□□ -1.91
RAD9AQ99638 AL022238.1-201ENST00000442557 355 ntBASIC3.14□□□□□ -1.91
RAD9AQ99638 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.14□□□□□ -1.91
RAD9AQ99638 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.14□□□□□ -1.91
RAD9AQ99638 MTCO2P18-201ENST00000457151 658 ntBASIC3.14□□□□□ -1.91
RAD9AQ99638 LARP1BP2-201ENST00000486594 519 ntBASIC3.14□□□□□ -1.91
RAD9AQ99638 AC092185.1-201ENST00000491371 97 ntBASIC3.14□□□□□ -1.91
RAD9AQ99638 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.14□□□□□ -1.91
RAD9AQ99638 AC022447.1-201ENST00000515358 464 ntBASIC3.14□□□□□ -1.91
RAD9AQ99638 RNU6-840P-201ENST00000517275 65 ntBASIC3.14□□□□□ -1.91
RAD9AQ99638 DEFB108A-201ENST00000530110 222 ntBASIC3.14□□□□□ -1.91
RAD9AQ99638 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms