Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2□□□□□ -2.09
VAT1Q99536 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2□□□□□ -2.09
VAT1Q99536 AC004520.1-201ENST00000608362 1413 ntBASIC2□□□□□ -2.09
VAT1Q99536 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VAT1Q99536 AL109809.4-201ENST00000603520 2185 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VAT1Q99536 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VAT1Q99536 SNORA63.3-201ENST00000362682 132 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 RNU6-97P-201ENST00000363387 104 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 SNORA38-201ENST00000363946 132 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 RNU6-1207P-201ENST00000384343 107 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.99□□□□□ -2.09
VAT1Q99536 U3.40-201ENST00000408706 208 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 RNU2-2P-201ENST00000410396 191 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 RNU6-920P-201ENST00000410926 92 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 USP9YP13-201ENST00000417797 480 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.99□□□□□ -2.09
VAT1Q99536 AL109913.1-201ENST00000421173 514 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.99□□□□□ -2.09
VAT1Q99536 BPY2DP-201ENST00000422208 265 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.99□□□□□ -2.09
VAT1Q99536 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.99□□□□□ -2.09
VAT1Q99536 UBE2D3P1-201ENST00000436669 444 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.99□□□□□ -2.09
VAT1Q99536 ANKRD26P4-201ENST00000455755 950 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.99□□□□□ -2.09
VAT1Q99536 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.99□□□□□ -2.09
VAT1Q99536 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.99□□□□□ -2.09
VAT1Q99536 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.99□□□□□ -2.09
VAT1Q99536 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.99□□□□□ -2.09
VAT1Q99536 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.99□□□□□ -2.09
VAT1Q99536 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.99□□□□□ -2.09
VAT1Q99536 BTF3P12-201ENST00000519620 469 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.99□□□□□ -2.09
VAT1Q99536 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.99□□□□□ -2.09
VAT1Q99536 OR6C7P-201ENST00000547875 934 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.99□□□□□ -2.09
VAT1Q99536 RPS3AP23-202ENST00000574601 686 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 MIR3935-201ENST00000583472 104 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 AL353997.4-201ENST00000586196 166 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 AC002545.1-201ENST00000592511 181 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 U2.15-201ENST00000611544 191 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 AL138478.1-201ENST00000612252 832 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 AC025594.3-201ENST00000613068 790 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 U2.16-201ENST00000613119 191 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 U2.12-201ENST00000613778 191 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 U2.20-201ENST00000613956 192 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 U2.9-201ENST00000615427 191 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 U2.11-201ENST00000616345 191 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 U2.2-201ENST00000616535 191 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 U2.3-201ENST00000617785 191 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 U2.19-201ENST00000618602 191 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 RNU2-1-201ENST00000618664 191 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 U2.6-201ENST00000619225 191 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 U2.5-201ENST00000619465 191 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 U2.10-201ENST00000620268 191 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 YWHAEP7-203ENST00000622054 312 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 AC019226.1-201ENST00000625666 515 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 AL079343.1-201ENST00000572358 1771 ntBASIC1.99□□□□□ -2.09
VAT1Q99536 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
VAT1Q99536 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
VAT1Q99536 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.98□□□□□ -2.09
VAT1Q99536 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
VAT1Q99536 RNU6-114P-201ENST00000384704 105 ntBASIC1.98□□□□□ -2.09
VAT1Q99536 RNU6-754P-201ENST00000391166 107 ntBASIC1.98□□□□□ -2.09
VAT1Q99536 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.98□□□□□ -2.09
VAT1Q99536 HMGB1P9-201ENST00000429856 646 ntBASIC1.98□□□□□ -2.09
VAT1Q99536 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.98□□□□□ -2.09
VAT1Q99536 AC097493.1-201ENST00000463958 372 ntBASIC1.98□□□□□ -2.09
VAT1Q99536 AC021382.1-201ENST00000483523 359 ntBASIC1.98□□□□□ -2.09
VAT1Q99536 RPS27P21-201ENST00000486977 252 ntBASIC1.98□□□□□ -2.09
VAT1Q99536 AC106872.3-201ENST00000495104 446 ntBASIC1.98□□□□□ -2.09
VAT1Q99536 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.98□□□□□ -2.09
VAT1Q99536 AC023141.11-201ENST00000508864 202 ntBASIC1.98□□□□□ -2.09
VAT1Q99536 RNA5SP364-201ENST00000516938 78 ntBASIC1.98□□□□□ -2.09
VAT1Q99536 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.98□□□□□ -2.09
VAT1Q99536 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.98□□□□□ -2.09
VAT1Q99536 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.98□□□□□ -2.09
VAT1Q99536 MIR4648-201ENST00000580107 72 ntBASIC1.98□□□□□ -2.09
VAT1Q99536 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.98□□□□□ -2.09
VAT1Q99536 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.98□□□□□ -2.09
VAT1Q99536 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.98□□□□□ -2.09
VAT1Q99536 SNORD14A-201ENST00000606526 91 ntBASIC1.98□□□□□ -2.09
VAT1Q99536 AC007349.4-201ENST00000608114 532 ntBASIC1.98□□□□□ -2.09
VAT1Q99536 AC009237.15-201ENST00000610252 501 ntBASIC1.98□□□□□ -2.09
VAT1Q99536 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.98□□□□□ -2.09
VAT1Q99536 AL589743.7-201ENST00000612637 233 ntBASIC1.98□□□□□ -2.09
VAT1Q99536 AC244517.12-201ENST00000623581 663 ntBASIC1.98□□□□□ -2.09
VAT1Q99536 AC012640.5-201ENST00000623897 319 ntBASIC1.98□□□□□ -2.09
VAT1Q99536 AP003485.1-201ENST00000625093 753 ntBASIC1.98□□□□□ -2.09
VAT1Q99536 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.98□□□□□ -2.09
VAT1Q99536 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
VAT1Q99536 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
VAT1Q99536 AC010889.1-201ENST00000566193 2666 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
VAT1Q99536 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
VAT1Q99536 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
VAT1Q99536 AL161781.1-201ENST00000354277 403 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 SNORA3A-201ENST00000364113 130 ntBASIC1.97□□□□□ -2.09
VAT1Q99536 Y_RNA.578-201ENST00000390903 88 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms