Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC007792.1-201ENST00000623023 402 ntBASIC0.66□□□□□ -2.3
SPENQ96T58 Y_RNA.142-201ENST00000363491 102 ntBASIC0.66□□□□□ -2.3
SPENQ96T58 FO393413.1-201ENST00000402892 195 ntBASIC0.66□□□□□ -2.3
SPENQ96T58 RNU6-942P-201ENST00000363002 107 ntBASIC0.65□□□□□ -2.31
SPENQ96T58 HMGB3P10-201ENST00000434734 572 ntBASIC0.65□□□□□ -2.31
SPENQ96T58 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.65□□□□□ -2.31
SPENQ96T58 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.65□□□□□ -2.31
SPENQ96T58 RPS20P20-201ENST00000460498 340 ntBASIC0.65□□□□□ -2.31
SPENQ96T58 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.65□□□□□ -2.31
SPENQ96T58 AL356057.2-201ENST00000403318 432 ntBASIC0.65□□□□□ -2.31
SPENQ96T58 RNU2-70P-201ENST00000410718 179 ntBASIC0.65□□□□□ -2.31
SPENQ96T58 CDC42P4-201ENST00000510507 563 ntBASIC0.65□□□□□ -2.31
SPENQ96T58 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.65□□□□□ -2.31
SPENQ96T58 AC123786.2-201ENST00000603459 275 ntBASIC0.65□□□□□ -2.31
SPENQ96T58 AC006249.1-201ENST00000621223 471 ntBASIC0.65□□□□□ -2.31
SPENQ96T58 AL031601.2-202ENST00000622650 282 ntBASIC0.65□□□□□ -2.31
SPENQ96T58 ANAPC10P1-201ENST00000395991 556 ntBASIC0.65□□□□□ -2.31
SPENQ96T58 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.65□□□□□ -2.31
SPENQ96T58 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.65□□□□□ -2.31
SPENQ96T58 AC009901.1-201ENST00000506703 541 ntBASIC0.65□□□□□ -2.31
SPENQ96T58 SCARNA1-201ENST00000517138 166 ntBASIC0.65□□□□□ -2.31
SPENQ96T58 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC0.65□□□□□ -2.31
SPENQ96T58 AC079148.1-201ENST00000565944 819 ntBASIC0.65□□□□□ -2.31
SPENQ96T58 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC0.65□□□□□ -2.31
SPENQ96T58 AC103810.9-201ENST00000606688 112 ntBASIC0.65□□□□□ -2.31
SPENQ96T58 AC245884.12-201ENST00000615364 59 ntBASIC0.65□□□□□ -2.31
SPENQ96T58 SNORD23.1-201ENST00000408212 104 ntBASIC0.64□□□□□ -2.31
SPENQ96T58 HMGB1P9-201ENST00000429856 646 ntBASIC0.64□□□□□ -2.31
SPENQ96T58 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.64□□□□□ -2.31
SPENQ96T58 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC0.64□□□□□ -2.31
SPENQ96T58 HMGN2P10-201ENST00000448085 265 ntBASIC0.64□□□□□ -2.31
SPENQ96T58 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.64□□□□□ -2.31
SPENQ96T58 AC117503.1-201ENST00000472241 394 ntBASIC0.64□□□□□ -2.31
SPENQ96T58 RPS27P26-201ENST00000494583 239 ntBASIC0.64□□□□□ -2.31
SPENQ96T58 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.64□□□□□ -2.31
SPENQ96T58 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
SPENQ96T58 PMCHL2-203ENST00000457791 237 ntBASIC0.64□□□□□ -2.31
SPENQ96T58 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.64□□□□□ -2.31
SPENQ96T58 AC093510.2-201ENST00000562820 896 ntBASIC0.64□□□□□ -2.31
SPENQ96T58 MIR4287-201ENST00000579398 78 ntBASIC0.64□□□□□ -2.31
SPENQ96T58 AC068787.1-201ENST00000623908 691 ntBASIC0.64□□□□□ -2.31
SPENQ96T58 AC009902.3-201ENST00000606235 2172 ntBASIC0.64□□□□□ -2.31
SPENQ96T58 RPL21P24-201ENST00000413752 448 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 AC079780.1-201ENST00000428259 207 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 MTND2P2-201ENST00000434633 945 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 CASP3P1-201ENST00000446037 609 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.63□□□□□ -2.31
SPENQ96T58 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.63□□□□□ -2.31
SPENQ96T58 HMGB3P17-201ENST00000504195 649 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 HMGB1P46-201ENST00000520062 610 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.63□□□□□ -2.31
SPENQ96T58 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.63□□□□□ -2.31
SPENQ96T58 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC0.63□□□□□ -2.31
SPENQ96T58 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC0.63□□□□□ -2.31
SPENQ96T58 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC0.63□□□□□ -2.31
SPENQ96T58 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
SPENQ96T58 AL161651.1-201ENST00000440882 223 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 RNU6-496P-201ENST00000516145 99 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 RNU6-229P-201ENST00000516614 102 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.63□□□□□ -2.31
SPENQ96T58 MIR4514-201ENST00000581410 57 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 LLPHP1-201ENST00000603571 367 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 AP000654.2-201ENST00000605633 586 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 AC107214.2-201ENST00000608204 634 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 AL356379.1-201ENST00000414105 126 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.63□□□□□ -2.31
SPENQ96T58 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.63□□□□□ -2.31
SPENQ96T58 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.63□□□□□ -2.31
SPENQ96T58 AC010099.1-201ENST00000455434 375 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 RPS27P23-201ENST00000487608 251 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.63□□□□□ -2.31
SPENQ96T58 AC009220.3-201ENST00000604318 586 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.63□□□□□ -2.31
SPENQ96T58 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
SPENQ96T58 ZNF736P3Y-201ENST00000428264 1465 ntBASIC0.63□□□□□ -2.31
SPENQ96T58 AC004022.2-201ENST00000413824 193 ntBASIC0.62□□□□□ -2.31
SPENQ96T58 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.62□□□□□ -2.31
SPENQ96T58 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.62□□□□□ -2.31
SPENQ96T58 snoU13.19-201ENST00000459148 104 ntBASIC0.62□□□□□ -2.31
SPENQ96T58 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SPENQ96T58 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.62□□□□□ -2.31
SPENQ96T58 AC023050.2-201ENST00000544968 387 ntBASIC0.62□□□□□ -2.31
SPENQ96T58 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SPENQ96T58 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.62□□□□□ -2.31
SPENQ96T58 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.62□□□□□ -2.31
SPENQ96T58 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
SPENQ96T58 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.62□□□□□ -2.31
SPENQ96T58 RNA5SP347-201ENST00000362445 119 ntBASIC0.62□□□□□ -2.31
SPENQ96T58 CISD1P1-201ENST00000393907 327 ntBASIC0.62□□□□□ -2.31
SPENQ96T58 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.62□□□□□ -2.31
SPENQ96T58 ELOCP10-201ENST00000440624 327 ntBASIC0.62□□□□□ -2.31
SPENQ96T58 RPL9P9-202ENST00000466501 579 ntBASIC0.62□□□□□ -2.31
SPENQ96T58 ELOCP34-201ENST00000604436 327 ntBASIC0.62□□□□□ -2.31
SPENQ96T58 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
SPENQ96T58 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
SPENQ96T58 AL022718.1-201ENST00000412004 84 ntBASIC0.62□□□□□ -2.31
SPENQ96T58 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.62□□□□□ -2.31
SPENQ96T58 HSFY3P-201ENST00000444242 1191 ntBASIC0.62□□□□□ -2.31
SPENQ96T58 RPS27P21-201ENST00000486977 252 ntBASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms