Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 RNU6-1208P-201ENST00000459588 107 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 RN7SL604P-201ENST00000492589 296 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 RPS27AP13-201ENST00000498403 237 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 HMGB1P22-201ENST00000505315 124 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 AP006587.4-201ENST00000526053 529 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 RANP3-201ENST00000530970 276 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 AC106785.1-201ENST00000565935 262 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 RPL23AP84-201ENST00000571193 464 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 AL670379.4-201ENST00000605279 254 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 AL158032.1-201ENST00000605401 106 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 MIR8059-201ENST00000620427 81 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 AL357559.1-201ENST00000622228 274 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.62□□□□□ -1.83
SNX18Q96RF0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNX18Q96RF0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNX18Q96RF0 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
SNX18Q96RF0 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SNX18Q96RF0 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.62□□□□□ -1.83
SNX18Q96RF0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.61□□□□□ -1.83
SNX18Q96RF0 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
SNX18Q96RF0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNX18Q96RF0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNX18Q96RF0 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
SNX18Q96RF0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNX18Q96RF0 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNX18Q96RF0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNX18Q96RF0 USP8P1-201ENST00000494673 3183 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNX18Q96RF0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SNX18Q96RF0 FRG1CP-201ENST00000358464 769 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 AL592114.1-201ENST00000403842 483 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.61□□□□□ -1.83
SNX18Q96RF0 EI24P1-201ENST00000416584 867 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 ARL5AP1-201ENST00000418991 388 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 NCOR1P3-201ENST00000420479 303 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 AC002075.2-201ENST00000425207 252 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 AC018644.1-201ENST00000429934 551 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 ARF4P2-201ENST00000430209 526 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.61□□□□□ -1.83
SNX18Q96RF0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.61□□□□□ -1.83
SNX18Q96RF0 AC020550.1-201ENST00000447385 163 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.61□□□□□ -1.83
SNX18Q96RF0 RPS24P6-201ENST00000452670 400 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.61□□□□□ -1.83
SNX18Q96RF0 CEACAMP4-201ENST00000457676 421 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 HMGB3P30-201ENST00000457863 606 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 snoU13.24-201ENST00000458998 104 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 RPL23AP62-201ENST00000463396 453 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 RPL9P32-201ENST00000464118 620 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 RN7SL330P-201ENST00000469709 307 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 MTND4P17-201ENST00000470444 350 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
SNX18Q96RF0 MTCO3P9-201ENST00000506989 781 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNX18Q96RF0 SNORA19.2-201ENST00000516013 114 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 Vault.1-201ENST00000516474 102 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 Y_RNA.691-201ENST00000516611 103 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.61□□□□□ -1.83
SNX18Q96RF0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.61□□□□□ -1.83
SNX18Q96RF0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.61□□□□□ -1.83
SNX18Q96RF0 AC025627.2-201ENST00000576220 160 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 AC005951.2-201ENST00000576282 495 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 AC010928.3-201ENST00000587712 541 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 AC005255.1-201ENST00000593748 216 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 DPPA3P3-201ENST00000603842 430 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 AC007619.2-201ENST00000605743 379 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 AC012531.5-201ENST00000611375 151 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 AC012409.4-201ENST00000612923 249 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 MIR492-201ENST00000638676 116 ntBASIC3.61□□□□□ -1.83
SNX18Q96RF0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SNX18Q96RF0 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.61□□□□□ -1.83
SNX18Q96RF0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
SNX18Q96RF0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SNX18Q96RF0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNX18Q96RF0 UBE3AP2-201ENST00000429033 2259 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SNX18Q96RF0 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SNX18Q96RF0 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SNX18Q96RF0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNX18Q96RF0 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SNX18Q96RF0 RNU5A-1-201ENST00000362698 116 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 SNORD35B-201ENST00000363660 87 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SNX18Q96RF0 Y_RNA.394-201ENST00000383942 103 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 U1.1-201ENST00000384101 164 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 SNORA36C-201ENST00000384289 132 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 Y_RNA.474-201ENST00000384341 102 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 MIR184-201ENST00000384962 84 ntBASIC3.6□□□□□ -1.83
SNX18Q96RF0 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms