Protein–RNA interactions for Protein: Q96PN7

TRERF1, Transcriptional-regulating factor 1, humanhuman

Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1Q96PN7 Y_RNA.541-201ENST00000384640 113 ntBASIC5.43□□□□□ -1.54
TRERF1Q96PN7 RNA5SP397-201ENST00000391323 118 ntBASIC5.43□□□□□ -1.54
TRERF1Q96PN7 RN7SKP267-201ENST00000410381 285 ntBASIC5.43□□□□□ -1.54
TRERF1Q96PN7 AC140479.3-201ENST00000418944 1126 ntBASIC5.43□□□□□ -1.54
TRERF1Q96PN7 RPS15AP40-201ENST00000419621 391 ntBASIC5.43□□□□□ -1.54
TRERF1Q96PN7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.43□□□□□ -1.54
TRERF1Q96PN7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.43□□□□□ -1.54
TRERF1Q96PN7 OR4C10P-201ENST00000434991 931 ntBASIC5.43□□□□□ -1.54
TRERF1Q96PN7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
TRERF1Q96PN7 DAP3P1-201ENST00000441522 278 ntBASIC5.43□□□□□ -1.54
TRERF1Q96PN7 AC073587.1-201ENST00000447093 876 ntBASIC5.43□□□□□ -1.54
TRERF1Q96PN7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.43□□□□□ -1.54
TRERF1Q96PN7 AL356981.1-201ENST00000454879 684 ntBASIC5.43□□□□□ -1.54
TRERF1Q96PN7 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.43□□□□□ -1.54
TRERF1Q96PN7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.43□□□□□ -1.54
TRERF1Q96PN7 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.43□□□□□ -1.54
TRERF1Q96PN7 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.43□□□□□ -1.54
TRERF1Q96PN7 RNU6-911P-201ENST00000516523 104 ntBASIC5.43□□□□□ -1.54
TRERF1Q96PN7 RPL23AP53-201ENST00000521854 457 ntBASIC5.43□□□□□ -1.54
TRERF1Q96PN7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC5.43□□□□□ -1.54
TRERF1Q96PN7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.43□□□□□ -1.54
TRERF1Q96PN7 MIR4300-201ENST00000581016 96 ntBASIC5.43□□□□□ -1.54
TRERF1Q96PN7 AC007619.2-201ENST00000605743 379 ntBASIC5.43□□□□□ -1.54
TRERF1Q96PN7 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.43□□□□□ -1.54
TRERF1Q96PN7 BX005214.3-202ENST00000619809 325 ntBASIC5.43□□□□□ -1.54
TRERF1Q96PN7 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
TRERF1Q96PN7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.43□□□□□ -1.54
TRERF1Q96PN7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.42□□□□□ -1.54
TRERF1Q96PN7 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
TRERF1Q96PN7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
TRERF1Q96PN7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRERF1Q96PN7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.42□□□□□ -1.54
TRERF1Q96PN7 AC139713.2-214ENST00000642059 1811 ntBASIC5.42□□□□□ -1.54
TRERF1Q96PN7 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC5.42□□□□□ -1.54
TRERF1Q96PN7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRERF1Q96PN7 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
TRERF1Q96PN7 SNORA69.1-201ENST00000390904 137 ntBASIC5.42□□□□□ -1.54
TRERF1Q96PN7 Y_RNA.592-201ENST00000410274 109 ntBASIC5.42□□□□□ -1.54
TRERF1Q96PN7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.42□□□□□ -1.54
TRERF1Q96PN7 AL591704.1-201ENST00000432574 275 ntBASIC5.42□□□□□ -1.54
TRERF1Q96PN7 AL445305.1-201ENST00000432577 575 ntBASIC5.42□□□□□ -1.54
TRERF1Q96PN7 CEACAMP1-201ENST00000434624 1035 ntBASIC5.42□□□□□ -1.54
TRERF1Q96PN7 AL589765.3-201ENST00000446084 462 ntBASIC5.42□□□□□ -1.54
TRERF1Q96PN7 NDUFB4P10-201ENST00000452541 359 ntBASIC5.42□□□□□ -1.54
TRERF1Q96PN7 AC022795.1-201ENST00000473808 480 ntBASIC5.42□□□□□ -1.54
TRERF1Q96PN7 HMGN2P13-201ENST00000476476 274 ntBASIC5.42□□□□□ -1.54
TRERF1Q96PN7 AC109925.1-201ENST00000478069 331 ntBASIC5.42□□□□□ -1.54
TRERF1Q96PN7 RN7SKP46-201ENST00000515942 234 ntBASIC5.42□□□□□ -1.54
TRERF1Q96PN7 ERHP1-201ENST00000523006 310 ntBASIC5.42□□□□□ -1.54
TRERF1Q96PN7 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.42□□□□□ -1.54
TRERF1Q96PN7 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.42□□□□□ -1.54
TRERF1Q96PN7 MIR3976-201ENST00000606807 139 ntBASIC5.42□□□□□ -1.54
TRERF1Q96PN7 AL591516.1-201ENST00000611326 274 ntBASIC5.42□□□□□ -1.54
TRERF1Q96PN7 MIR376A1-201ENST00000616574 68 ntBASIC5.42□□□□□ -1.54
TRERF1Q96PN7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC5.42□□□□□ -1.54
TRERF1Q96PN7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRERF1Q96PN7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.42□□□□□ -1.54
TRERF1Q96PN7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
TRERF1Q96PN7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRERF1Q96PN7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRERF1Q96PN7 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.41□□□□□ -1.54
TRERF1Q96PN7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRERF1Q96PN7 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRERF1Q96PN7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRERF1Q96PN7 MIR129-1-201ENST00000384972 72 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 U3.22-201ENST00000391120 215 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.41□□□□□ -1.54
TRERF1Q96PN7 RPEP3-201ENST00000425462 676 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 RPS26P47-201ENST00000427219 348 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.41□□□□□ -1.54
TRERF1Q96PN7 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.41□□□□□ -1.54
TRERF1Q96PN7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TRERF1Q96PN7 H2AFZP5-201ENST00000446960 382 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 TPT1P12-201ENST00000448968 492 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 AL591623.2-201ENST00000449978 222 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 RPL21P104-201ENST00000464143 478 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 AC091021.1-201ENST00000468051 388 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 RPS23P5-201ENST00000495419 428 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 AC010469.2-201ENST00000496412 480 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.41□□□□□ -1.54
TRERF1Q96PN7 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.41□□□□□ -1.54
TRERF1Q96PN7 AC100870.1-201ENST00000522035 505 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 AC005868.1-201ENST00000536421 331 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 AC105129.1-201ENST00000560250 297 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.41□□□□□ -1.54
TRERF1Q96PN7 AL078605.1-201ENST00000603529 500 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 AC116447.1-201ENST00000613153 453 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 AC083809.1-201ENST00000615051 472 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 SNX18P1Y-201ENST00000616231 511 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 SNHG22-203ENST00000617833 660 ntBASIC5.41□□□□□ -1.54
TRERF1Q96PN7 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
TRERF1Q96PN7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.41□□□□□ -1.54
TRERF1Q96PN7 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.41□□□□□ -1.54
TRERF1Q96PN7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRERF1Q96PN7 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRERF1Q96PN7 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
TRERF1Q96PN7 Z75746.1-201ENST00000440243 2080 ntBASIC5.4□□□□□ -1.54
TRERF1Q96PN7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TRERF1Q96PN7 AP001148.1-201ENST00000624124 2359 ntBASIC5.4□□□□□ -1.54
TRERF1Q96PN7 Y_RNA.8-201ENST00000362353 102 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms