Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 HMGB1P17-201ENST00000403495 628 ntBASIC2.54□□□□□ -2
USP47Q96K76 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.54□□□□□ -2
USP47Q96K76 PPP1R11P2-201ENST00000423543 382 ntBASIC2.54□□□□□ -2
USP47Q96K76 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.54□□□□□ -2
USP47Q96K76 RPL7L1P10-201ENST00000427790 463 ntBASIC2.54□□□□□ -2
USP47Q96K76 GTF2IP3-201ENST00000433887 494 ntBASIC2.54□□□□□ -2
USP47Q96K76 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.54□□□□□ -2
USP47Q96K76 USP9YP15-201ENST00000442391 422 ntBASIC2.54□□□□□ -2
USP47Q96K76 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.54□□□□□ -2
USP47Q96K76 RPL18AP17-201ENST00000455326 198 ntBASIC2.54□□□□□ -2
USP47Q96K76 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.54□□□□□ -2
USP47Q96K76 SNORD13-201ENST00000459299 104 ntBASIC2.54□□□□□ -2
USP47Q96K76 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.54□□□□□ -2
USP47Q96K76 AC104629.1-201ENST00000494226 508 ntBASIC2.54□□□□□ -2
USP47Q96K76 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.54□□□□□ -2
USP47Q96K76 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.54□□□□□ -2
USP47Q96K76 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.54□□□□□ -2
USP47Q96K76 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.54□□□□□ -2
USP47Q96K76 AC090888.1-201ENST00000561335 1141 ntBASIC2.54□□□□□ -2
USP47Q96K76 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.54□□□□□ -2
USP47Q96K76 AL049838.1-201ENST00000563647 981 ntBASIC2.54□□□□□ -2
USP47Q96K76 MTND3P13-201ENST00000574391 343 ntBASIC2.54□□□□□ -2
USP47Q96K76 AL356280.1-201ENST00000603614 379 ntBASIC2.54□□□□□ -2
USP47Q96K76 AC024060.1-201ENST00000607052 494 ntBASIC2.54□□□□□ -2
USP47Q96K76 AC002550.2-201ENST00000621246 394 ntBASIC2.54□□□□□ -2
USP47Q96K76 DUXAP9-208ENST00000622815 614 ntBASIC2.54□□□□□ -2
USP47Q96K76 AC231657.1-201ENST00000624313 397 ntBASIC2.54□□□□□ -2
USP47Q96K76 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
USP47Q96K76 AL022578.1-201ENST00000439330 1433 ntBASIC2.54□□□□□ -2
USP47Q96K76 SNORA16.1-201ENST00000364597 132 ntBASIC2.53□□□□□ -2
USP47Q96K76 MIR514A1-201ENST00000385133 98 ntBASIC2.53□□□□□ -2
USP47Q96K76 SNORA40.2-201ENST00000390847 128 ntBASIC2.53□□□□□ -2
USP47Q96K76 RNA5SP354-201ENST00000391247 136 ntBASIC2.53□□□□□ -2
USP47Q96K76 RNU6-321P-201ENST00000410912 106 ntBASIC2.53□□□□□ -2
USP47Q96K76 AL353729.1-201ENST00000425044 720 ntBASIC2.53□□□□□ -2
USP47Q96K76 AC009414.1-201ENST00000427200 443 ntBASIC2.53□□□□□ -2
USP47Q96K76 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.53□□□□□ -2
USP47Q96K76 snoU13.8-201ENST00000458890 104 ntBASIC2.53□□□□□ -2
USP47Q96K76 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.53□□□□□ -2
USP47Q96K76 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.53□□□□□ -2
USP47Q96K76 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.53□□□□□ -2
USP47Q96K76 SNORA19.3-201ENST00000516165 130 ntBASIC2.53□□□□□ -2
USP47Q96K76 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.53□□□□□ -2
USP47Q96K76 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.53□□□□□ -2
USP47Q96K76 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.53□□□□□ -2
USP47Q96K76 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.53□□□□□ -2
USP47Q96K76 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.53□□□□□ -2
USP47Q96K76 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.53□□□□□ -2
USP47Q96K76 AL022067.1-201ENST00000602426 454 ntBASIC2.53□□□□□ -2
USP47Q96K76 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.53□□□□□ -2
USP47Q96K76 MIR6130-201ENST00000619419 109 ntBASIC2.53□□□□□ -2
USP47Q96K76 AC123767.1-202ENST00000620407 817 ntBASIC2.53□□□□□ -2
USP47Q96K76 AC084768.2-201ENST00000622736 221 ntBASIC2.53□□□□□ -2
USP47Q96K76 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
USP47Q96K76 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
USP47Q96K76 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2.01
USP47Q96K76 RNU6-1035P-201ENST00000384477 107 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 FO393413.1-201ENST00000402892 195 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
USP47Q96K76 AL365496.1-201ENST00000426885 215 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 AL590383.1-201ENST00000428602 75 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.52□□□□□ -2.01
USP47Q96K76 AL512844.2-201ENST00000433990 593 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC2.52□□□□□ -2.01
USP47Q96K76 AL714022.1-201ENST00000439897 151 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.52□□□□□ -2.01
USP47Q96K76 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC2.52□□□□□ -2.01
USP47Q96K76 AC092155.2-201ENST00000454675 477 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 KPNA2P1-201ENST00000458289 1591 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 RNU7-136P-201ENST00000458819 69 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 AC116337.2-201ENST00000477662 156 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 AL135752.1-201ENST00000479477 471 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 RPS27P26-201ENST00000494583 239 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.52□□□□□ -2.01
USP47Q96K76 RPL21P131-201ENST00000497298 483 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 AIG1P1-201ENST00000503376 148 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.52□□□□□ -2.01
USP47Q96K76 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.52□□□□□ -2.01
USP47Q96K76 AC113347.3-201ENST00000509113 148 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 AC107393.1-201ENST00000512403 346 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 RNU6-1256P-201ENST00000516539 103 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 RNU6-1282P-201ENST00000516735 96 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 AC005832.3-201ENST00000537929 631 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.52□□□□□ -2.01
USP47Q96K76 AC068135.2-201ENST00000569293 1028 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.52□□□□□ -2.01
USP47Q96K76 MIR3683-201ENST00000580847 82 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.52□□□□□ -2.01
USP47Q96K76 AL606834.3-201ENST00000602615 496 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 AC104985.3-201ENST00000623479 597 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 AC068880.5-201ENST00000624331 290 ntBASIC2.52□□□□□ -2.01
USP47Q96K76 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.51□□□□□ -2.01
USP47Q96K76 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
USP47Q96K76 HSPE1P11-201ENST00000339579 310 ntBASIC2.51□□□□□ -2.01
USP47Q96K76 RNU6-1180P-201ENST00000364935 107 ntBASIC2.51□□□□□ -2.01
USP47Q96K76 RNU6-1257P-201ENST00000384625 110 ntBASIC2.51□□□□□ -2.01
USP47Q96K76 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
USP47Q96K76 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
USP47Q96K76 Z75741.2-201ENST00000417272 1167 ntBASIC2.51□□□□□ -2.01
USP47Q96K76 AL449283.1-202ENST00000418249 604 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms