Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 RNU2-27P-201ENST00000516185 142 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 RNU6-579P-201ENST00000516879 102 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 NRON-201ENST00000517270 370 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 AP005205.1-201ENST00000563503 508 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 MIR3921-201ENST00000577308 85 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 AC067852.3-201ENST00000589177 561 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 AC092628.2-201ENST00000622492 339 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 AL136164.4-201ENST00000625013 2135 ntBASIC4.03□□□□□ -1.76
CDK5RAP3Q96JB5 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 ZNF807-201ENST00000328088 1707 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 NACAP2-201ENST00000318548 624 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 RNU6-451P-201ENST00000362921 107 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 Y_RNA.126-201ENST00000363382 111 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 SNORD115-7-201ENST00000365306 82 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 Y_RNA.576-201ENST00000384781 102 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 AL356967.1-201ENST00000406305 431 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 AL354719.1-201ENST00000406535 843 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 OR9R1P-201ENST00000412200 877 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 SNRPEP10-201ENST00000420249 274 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 AL451054.2-201ENST00000420896 202 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 RPS29P25-201ENST00000481709 171 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 AC092436.1-201ENST00000506450 503 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 AC074344.1-201ENST00000512823 224 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 SNORA70.16-201ENST00000516390 95 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 RNU6-358P-201ENST00000516564 75 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 RN7SKP219-201ENST00000516825 296 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 AC022690.1-201ENST00000526681 550 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 MIR3186-201ENST00000577404 85 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 BNIP3P30-201ENST00000601184 574 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 AC104763.2-201ENST00000604179 382 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 DISC2.1-201ENST00000612827 205 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 MIR6798-201ENST00000612887 67 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 AC011155.2-201ENST00000623202 216 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 AC024614.3-201ENST00000637860 256 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 AC007823.1-201ENST00000569932 1566 ntBASIC4.02□□□□□ -1.77
CDK5RAP3Q96JB5 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 PWAR6-201ENST00000552334 4618 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 RPL7P26-201ENST00000333817 754 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 SNORD9-201ENST00000362566 104 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 RNA5SP42-201ENST00000364278 115 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 SNORD37.1-201ENST00000390968 65 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 RNU6-876P-201ENST00000391295 104 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 U3.39-201ENST00000408569 239 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AC022028.1-201ENST00000412054 408 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AC068533.1-201ENST00000418542 415 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 RPL30P16-201ENST00000419341 429 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AL109913.1-201ENST00000421173 514 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 VN1R34P-201ENST00000447387 883 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AC104806.1-201ENST00000508720 308 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 RN7SKP60-201ENST00000516985 239 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AC118273.2-201ENST00000532092 465 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AL158032.1-201ENST00000605401 106 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AC008962.1-201ENST00000605729 304 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AC008945.2-201ENST00000606056 604 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 RMST_3.1-201ENST00000611651 109 ntBASIC4.01□□□□□ -1.77
CDK5RAP3Q96JB5 AL365204.3-201ENST00000612448 685 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms