Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL133547.1-201ENST00000448546 220 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS3Q969F9 AL136097.1-201ENST00000456945 913 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS3Q969F9 AL162395.1-201ENST00000457882 422 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS3Q969F9 RN7SL330P-201ENST00000469709 307 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 AC084357.1-201ENST00000473404 255 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 TRBV1-201ENST00000476502 284 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.03□□□□□ -1.76
HPS3Q969F9 AC116353.2-201ENST00000505332 712 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 RANP9-201ENST00000519957 271 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS3Q969F9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.03□□□□□ -1.76
HPS3Q969F9 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.03□□□□□ -1.76
HPS3Q969F9 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.03□□□□□ -1.76
HPS3Q969F9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.03□□□□□ -1.76
HPS3Q969F9 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.03□□□□□ -1.76
HPS3Q969F9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.03□□□□□ -1.76
HPS3Q969F9 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HPS3Q969F9 AL020991.1-201ENST00000612314 373 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.03□□□□□ -1.76
HPS3Q969F9 MIR3662-201ENST00000637030 95 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.03□□□□□ -1.76
HPS3Q969F9 AP000553.6-201ENST00000641242 118 ntBASIC4.03□□□□□ -1.76
HPS3Q969F9 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
HPS3Q969F9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.03□□□□□ -1.76
HPS3Q969F9 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HPS3Q969F9 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HPS3Q969F9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.02□□□□□ -1.77
HPS3Q969F9 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HPS3Q969F9 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HPS3Q969F9 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HPS3Q969F9 MIR423-201ENST00000362201 94 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 RNA5SP42-201ENST00000364278 115 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 MIR493-201ENST00000385254 89 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HPS3Q969F9 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HPS3Q969F9 AL590704.1-201ENST00000402856 794 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.02□□□□□ -1.77
HPS3Q969F9 AL354719.1-201ENST00000406535 843 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 OR6C66P-201ENST00000414917 930 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 AC017079.2-201ENST00000416102 485 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 BTF3L4P3-201ENST00000418879 476 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.02□□□□□ -1.77
HPS3Q969F9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.02□□□□□ -1.77
HPS3Q969F9 AL591212.2-201ENST00000433923 257 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.02□□□□□ -1.77
HPS3Q969F9 AC009237.8-201ENST00000445492 379 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 SNRPGP3-201ENST00000469405 227 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 UBE2CP3-201ENST00000502715 450 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.02□□□□□ -1.77
HPS3Q969F9 RNU6-123P-201ENST00000516163 102 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.02□□□□□ -1.77
HPS3Q969F9 AC004024.1-201ENST00000549244 247 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.02□□□□□ -1.77
HPS3Q969F9 AC008521.1-201ENST00000587471 187 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.02□□□□□ -1.77
HPS3Q969F9 AL670379.4-201ENST00000605279 254 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 AC107294.1-201ENST00000609524 467 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 AC090132.2-201ENST00000615881 347 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 AC103710.2-202ENST00000641454 2853 ntBASIC4.02□□□□□ -1.77
HPS3Q969F9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HPS3Q969F9 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HPS3Q969F9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HPS3Q969F9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HPS3Q969F9 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.01□□□□□ -1.77
HPS3Q969F9 RNU6-552P-201ENST00000362869 119 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 SNORD46.1-201ENST00000364139 104 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 RNU6-741P-201ENST00000383889 107 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 RNU6-903P-201ENST00000391270 109 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 AL136116.1-201ENST00000403591 381 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 RNA5SP118-201ENST00000410385 109 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 RNU4-46P-201ENST00000410818 138 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 RNU6-373P-201ENST00000411247 98 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 RNA5SP111-201ENST00000411386 101 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 RPS12P24-201ENST00000412619 387 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 RPL30P2-201ENST00000414021 291 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 AC080125.1-201ENST00000414888 684 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 AL139413.1-201ENST00000421309 217 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 AC091390.3-201ENST00000426478 338 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HPS3Q969F9 NOTCH2P1-201ENST00000443481 624 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.01□□□□□ -1.77
HPS3Q969F9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.01□□□□□ -1.77
HPS3Q969F9 SNRPFP3-201ENST00000457792 225 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 RPL21P8-201ENST00000465083 535 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 RPS23P3-201ENST00000470993 430 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 RPL39P36-201ENST00000490784 156 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 AL160314.1-201ENST00000490836 438 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.01□□□□□ -1.77
HPS3Q969F9 AC092436.1-201ENST00000506450 503 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.01□□□□□ -1.77
HPS3Q969F9 RNU1-61P-201ENST00000516107 151 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 RNU6-143P-201ENST00000516942 93 ntBASIC4.01□□□□□ -1.77
HPS3Q969F9 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.01□□□□□ -1.77
HPS3Q969F9 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.01□□□□□ -1.77
HPS3Q969F9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.01□□□□□ -1.77
HPS3Q969F9 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms