Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC053481.1-201ENST00000467217 306 ntBASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 AC022795.1-201ENST00000473808 480 ntBASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 COX6B1P5-201ENST00000509843 249 ntBASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 AP004242.1-201ENST00000533701 349 ntBASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 RN7SL652P-201ENST00000577769 300 ntBASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 AC008873.1-201ENST00000625051 138 ntBASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
NKX2-3Q8TAU0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 AL360270.2-201ENST00000562952 5985 ntBASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 RNU6-755P-201ENST00000364400 103 ntBASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 RNU6-818P-201ENST00000364837 108 ntBASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 SNORA5.1-201ENST00000384275 131 ntBASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 AL096701.2-201ENST00000416920 238 ntBASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 RPS4XP22-201ENST00000480755 780 ntBASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 RNU6-1234P-201ENST00000516877 103 ntBASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 MIR4423-201ENST00000580922 80 ntBASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 MIR548AC-201ENST00000585049 88 ntBASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 AL391358.1-201ENST00000605342 190 ntBASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 AC039056.2-201ENST00000622261 511 ntBASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 AC083843.3-201ENST00000623679 2186 ntBASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 AP002512.4-202ENST00000641599 4530 ntBASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.91□□□□□ -1.46
NKX2-3Q8TAU0 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 AL445487.1-201ENST00000415694 1580 ntBASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 AC092376.2-201ENST00000622621 4116 ntBASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 AC007685.1-201ENST00000329806 452 ntBASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 RNA5SP191-201ENST00000362585 102 ntBASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 Y_RNA.75-201ENST00000362927 97 ntBASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 RNU6-653P-201ENST00000363074 106 ntBASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 AC019155.1-201ENST00000382242 574 ntBASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 RPL23AP56-201ENST00000460778 453 ntBASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 RPS26P21-201ENST00000475397 348 ntBASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 SNORA31.3-201ENST00000516029 96 ntBASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 RNU6-27P-201ENST00000516146 107 ntBASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 AC009314.1-201ENST00000603871 304 ntBASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 AL590392.1-201ENST00000604960 446 ntBASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 RMST_4.1-201ENST00000616886 107 ntBASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 AL591926.4-201ENST00000616895 298 ntBASIC5.9□□□□□ -1.46
NKX2-3Q8TAU0 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
NKX2-3Q8TAU0 AP005435.3-201ENST00000531260 3198 ntBASIC5.9□□□□□ -1.47
NKX2-3Q8TAU0 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
NKX2-3Q8TAU0 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.9□□□□□ -1.47
NKX2-3Q8TAU0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
NKX2-3Q8TAU0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NKX2-3Q8TAU0 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.9□□□□□ -1.47
NKX2-3Q8TAU0 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.89□□□□□ -1.47
NKX2-3Q8TAU0 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms