Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 7SK.7-201ENST00000603504 247 ntBASIC4.68□□□□□ -1.66
PHC3Q8NDX5 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.68□□□□□ -1.66
PHC3Q8NDX5 AL391358.1-201ENST00000605342 190 ntBASIC4.68□□□□□ -1.66
PHC3Q8NDX5 AL161616.1-201ENST00000611867 286 ntBASIC4.68□□□□□ -1.66
PHC3Q8NDX5 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.68□□□□□ -1.66
PHC3Q8NDX5 Z69720.2-201ENST00000624755 279 ntBASIC4.68□□□□□ -1.66
PHC3Q8NDX5 AL158163.1-201ENST00000603915 1649 ntBASIC4.68□□□□□ -1.66
PHC3Q8NDX5 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PHC3Q8NDX5 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.68□□□□□ -1.66
PHC3Q8NDX5 MFSD8-242ENST00000641690 4199 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 Y_RNA.39-201ENST00000362620 98 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 RNU6-596P-201ENST00000365395 98 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 Y_RNA.452-201ENST00000384202 108 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 BX510359.2-201ENST00000417920 305 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 TOMM22P1-201ENST00000418578 312 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 AC243428.1-201ENST00000421099 264 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 TOMM20P4-201ENST00000427861 435 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 H2AFZP6-201ENST00000444403 394 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 AC011005.2-201ENST00000487324 359 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 AC091868.1-201ENST00000508746 304 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 ACA59.1-201ENST00000515966 143 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 RNU1-86P-201ENST00000516108 154 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 RNU1-107P-201ENST00000516617 154 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 RNA5SP291-201ENST00000517222 105 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 MIR5699-201ENST00000578903 90 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 AC093227.2-201ENST00000589357 285 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.67□□□□□ -1.66
PHC3Q8NDX5 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PHC3Q8NDX5 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 MARK2P15-201ENST00000432204 2186 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 RN7SKP115-201ENST00000363177 317 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 Y_RNA.176-201ENST00000363815 109 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 MIR585-201ENST00000384887 94 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 MIR937-201ENST00000401271 86 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 RN7SKP267-201ENST00000410381 285 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 Z85995.1-201ENST00000415547 335 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 AC093151.1-201ENST00000427711 313 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 AC005154.2-201ENST00000438110 379 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 MTATP8P1-201ENST00000467115 207 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 RPS23P3-201ENST00000470993 430 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 RNA5SP290-201ENST00000517133 127 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 IGLV3-26-201ENST00000520756 302 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 ATP5J2P6-201ENST00000565203 266 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 AL139395.1-201ENST00000603662 160 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 AP000787.2-201ENST00000604432 568 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 MIR6853-201ENST00000619642 74 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 MIR7154-201ENST00000620673 73 ntBASIC4.66□□□□□ -1.66
PHC3Q8NDX5 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PHC3Q8NDX5 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
PHC3Q8NDX5 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
PHC3Q8NDX5 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
PHC3Q8NDX5 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
PHC3Q8NDX5 MAPK10-372ENST00000641954 3413 ntBASIC4.65□□□□□ -1.66
PHC3Q8NDX5 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.65□□□□□ -1.66
PHC3Q8NDX5 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.65□□□□□ -1.66
PHC3Q8NDX5 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms