Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 PGBD4P3-201ENST00000440731 581 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AC104563.1-201ENST00000476147 376 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AC109486.1-201ENST00000486833 374 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 RPS29P20-201ENST00000489592 171 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 RPS29P21-201ENST00000496272 170 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AC023141.11-201ENST00000508864 202 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AC025755.1-201ENST00000521306 278 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AP003497.1-201ENST00000528472 562 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AL359212.1-201ENST00000556608 614 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AC135628.1-201ENST00000568867 534 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 MTND4LP25-201ENST00000570218 163 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 MIR4648-201ENST00000580107 72 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AL357094.1-201ENST00000603845 844 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AC021749.1-201ENST00000604322 607 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AL139344.1-201ENST00000605228 195 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 U2.15-201ENST00000611544 191 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AC005332.10-201ENST00000612725 619 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 U2.16-201ENST00000613119 191 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 U2.12-201ENST00000613778 191 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 U2.20-201ENST00000613956 192 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 SDR42E1P2-201ENST00000614861 481 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 U2.9-201ENST00000615427 191 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 U2.11-201ENST00000616345 191 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 U2.2-201ENST00000616535 191 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AL136981.2-201ENST00000617319 734 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 U2.3-201ENST00000617785 191 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 U2.19-201ENST00000618602 191 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 RNU2-1-201ENST00000618664 191 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 U2.6-201ENST00000619225 191 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 U2.5-201ENST00000619465 191 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 U2.10-201ENST00000620268 191 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 OR1S1-201ENST00000624470 978 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 AC004520.1-201ENST00000608362 1413 ntBASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
ZIC4Q8N9L1 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 RNU6-223P-201ENST00000362830 107 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 U8.2-201ENST00000363156 134 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 SNORA70B-201ENST00000384210 135 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AL079342.1-201ENST00000401460 267 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AL590084.2-201ENST00000401481 382 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AL356421.1-201ENST00000403255 413 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AL590084.1-201ENST00000407885 387 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 TIMM9P2-201ENST00000419324 266 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AC027124.2-201ENST00000428249 105 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 ZYG11AP1-201ENST00000430329 837 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 RPL35AP22-201ENST00000436855 335 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 RPL32P28-201ENST00000443577 397 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AC079203.1-201ENST00000487972 404 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AC098591.2-201ENST00000510152 315 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AC005832.3-201ENST00000537929 631 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AL158211.2-201ENST00000607282 395 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AC103710.1-201ENST00000610003 901 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AC009237.15-201ENST00000610252 501 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AC013412.1-201ENST00000610687 192 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 YWHAEP7-203ENST00000622054 312 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AP002791.1-201ENST00000623291 381 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 AL390862.1-201ENST00000635467 1469 ntBASIC1.82□□□□□ -2.12
ZIC4Q8N9L1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 AL596028.1-201ENST00000326971 197 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 RNA5SP160-201ENST00000364866 120 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 RNA5SP37-201ENST00000365420 130 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 SNORA6-201ENST00000384033 151 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 RNU4-52P-201ENST00000384209 138 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 RNU6-114P-201ENST00000384704 105 ntBASIC1.81□□□□□ -2.12
ZIC4Q8N9L1 RNU6-220P-201ENST00000390919 107 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms