Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC073063.1-201ENST00000434352 607 ntBASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 BNIP3P2-201ENST00000441221 577 ntBASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 AC016691.1-201ENST00000441321 413 ntBASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 GMFBP1-201ENST00000467831 427 ntBASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 APOOP4-201ENST00000513530 597 ntBASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 RNU6-718P-201ENST00000516166 105 ntBASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 Y_RNA.704-201ENST00000516851 102 ntBASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 RNA5SP471-201ENST00000516971 106 ntBASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 CASP1P1-201ENST00000526345 212 ntBASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 AC008752.3-201ENST00000588113 712 ntBASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 AC009570.1-201ENST00000609599 745 ntBASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 AC068944.2-201ENST00000610373 403 ntBASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 AL390240.1-201ENST00000612950 384 ntBASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 MIR1321-201ENST00000637766 79 ntBASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CCDC33Q8N5R6 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 AC004972.1-201ENST00000623934 2209 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 MTND5P1-201ENST00000445440 1375 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 AL139276.1-201ENST00000311910 1001 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 RNU6-1167P-201ENST00000363227 94 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 Y_RNA.402-201ENST00000383972 102 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 Y_RNA.576-201ENST00000384781 102 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 MTHFD2P2-201ENST00000407725 247 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 ATP5A1P2-201ENST00000412323 255 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 AC092809.3-201ENST00000415453 231 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 AP000907.1-201ENST00000428428 510 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 Z82210.1-201ENST00000440037 231 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 RPS29P15-201ENST00000458329 171 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 RNU6-261P-201ENST00000459506 102 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 RPL7P5-201ENST00000471472 736 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 AF213884.2-201ENST00000510417 903 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 SNORA74D-201ENST00000516404 141 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 RNU6-685P-201ENST00000517088 95 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 AC109635.3-201ENST00000529536 185 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 AC037471.2-201ENST00000564941 598 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 AC098826.3-201ENST00000603823 466 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 AL161798.1-201ENST00000604630 131 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 RNVU1-4-201ENST00000612985 164 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 AC011155.2-201ENST00000623202 216 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 MIR3688-2-201ENST00000636963 87 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 AC006020.1-201ENST00000420179 1854 ntBASIC3.79□□□□□ -1.8
CCDC33Q8N5R6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 RNU6-1090P-201ENST00000364065 94 ntBASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 RNU6-483P-201ENST00000384088 108 ntBASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 RNU6-1029P-201ENST00000384109 107 ntBASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 MIR490-201ENST00000384865 128 ntBASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 SNORD115-47-201ENST00000391226 86 ntBASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 RPS12P24-201ENST00000412619 387 ntBASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 AC000111.3-201ENST00000433478 193 ntBASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 RPS24P13-201ENST00000442520 397 ntBASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 RPS29P31-201ENST00000446147 164 ntBASIC3.78□□□□□ -1.8
CCDC33Q8N5R6 RPL21P23-201ENST00000446654 460 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms