Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.52□□□□□ -2.17
VPS8Q8N3P4 MIR151B-201ENST00000584249 96 ntBASIC1.52□□□□□ -2.17
VPS8Q8N3P4 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.52□□□□□ -2.17
VPS8Q8N3P4 AL355877.2-201ENST00000603670 358 ntBASIC1.52□□□□□ -2.17
VPS8Q8N3P4 AC126118.1-201ENST00000607744 628 ntBASIC1.52□□□□□ -2.17
VPS8Q8N3P4 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
VPS8Q8N3P4 MKKS-204ENST00000639674 192 ntBASIC1.52□□□□□ -2.17
VPS8Q8N3P4 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
VPS8Q8N3P4 RNU6-374P-201ENST00000364146 108 ntBASIC1.51□□□□□ -2.17
VPS8Q8N3P4 MIR147B-201ENST00000390185 80 ntBASIC1.51□□□□□ -2.17
VPS8Q8N3P4 RNA5SP56-201ENST00000410277 118 ntBASIC1.51□□□□□ -2.17
VPS8Q8N3P4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.51□□□□□ -2.17
VPS8Q8N3P4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
VPS8Q8N3P4 AL359273.1-201ENST00000510918 627 ntBASIC1.51□□□□□ -2.17
VPS8Q8N3P4 AC109446.2-201ENST00000567872 497 ntBASIC1.51□□□□□ -2.17
VPS8Q8N3P4 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS8Q8N3P4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.51□□□□□ -2.17
VPS8Q8N3P4 ZNF92P3-201ENST00000596594 954 ntBASIC1.51□□□□□ -2.17
VPS8Q8N3P4 AC103810.9-201ENST00000606688 112 ntBASIC1.51□□□□□ -2.17
VPS8Q8N3P4 U6.48-201ENST00000618523 106 ntBASIC1.51□□□□□ -2.17
VPS8Q8N3P4 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.51□□□□□ -2.17
VPS8Q8N3P4 AC097372.4-201ENST00000625025 466 ntBASIC1.51□□□□□ -2.17
VPS8Q8N3P4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
VPS8Q8N3P4 AC008555.8-201ENST00000623602 2168 ntBASIC1.51□□□□□ -2.17
VPS8Q8N3P4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
VPS8Q8N3P4 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
VPS8Q8N3P4 RNU6-1243P-201ENST00000364028 107 ntBASIC1.5□□□□□ -2.17
VPS8Q8N3P4 CISD1P1-201ENST00000393907 327 ntBASIC1.5□□□□□ -2.17
VPS8Q8N3P4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.5□□□□□ -2.17
VPS8Q8N3P4 AC079780.1-201ENST00000428259 207 ntBASIC1.5□□□□□ -2.17
VPS8Q8N3P4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS8Q8N3P4 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.5□□□□□ -2.17
VPS8Q8N3P4 BUD31P2-201ENST00000449374 300 ntBASIC1.5□□□□□ -2.17
VPS8Q8N3P4 RNU1-98P-201ENST00000458992 160 ntBASIC1.5□□□□□ -2.17
VPS8Q8N3P4 AC091965.2-201ENST00000512324 613 ntBASIC1.5□□□□□ -2.17
VPS8Q8N3P4 SNORA31.25-201ENST00000517242 134 ntBASIC1.5□□□□□ -2.17
VPS8Q8N3P4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS8Q8N3P4 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS8Q8N3P4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS8Q8N3P4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.5□□□□□ -2.17
VPS8Q8N3P4 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC1.5□□□□□ -2.17
VPS8Q8N3P4 MIR4529-201ENST00000578110 78 ntBASIC1.5□□□□□ -2.17
VPS8Q8N3P4 AL669831.4-202ENST00000590817 238 ntBASIC1.5□□□□□ -2.17
VPS8Q8N3P4 AC021749.1-201ENST00000604322 607 ntBASIC1.5□□□□□ -2.17
VPS8Q8N3P4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
VPS8Q8N3P4 AC027309.3-201ENST00000623419 351 ntBASIC1.5□□□□□ -2.17
VPS8Q8N3P4 AC068700.1-201ENST00000565862 3754 ntBASIC1.5□□□□□ -2.17
VPS8Q8N3P4 AC123912.3-201ENST00000600907 1367 ntBASIC1.5□□□□□ -2.17
VPS8Q8N3P4 RNU6-185P-201ENST00000384421 107 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 MIR150-201ENST00000385048 84 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 RPL21P90-201ENST00000415692 466 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.49□□□□□ -2.17
VPS8Q8N3P4 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.49□□□□□ -2.17
VPS8Q8N3P4 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.49□□□□□ -2.17
VPS8Q8N3P4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.49□□□□□ -2.17
VPS8Q8N3P4 RNU6-1004P-201ENST00000516584 111 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 RNU6-928P-201ENST00000516876 104 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 AL160236.1-201ENST00000556317 195 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 VN1R107P-201ENST00000601784 209 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 AL445493.3-201ENST00000619568 477 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS8Q8N3P4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
VPS8Q8N3P4 ZNF702P-202ENST00000434269 1966 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
VPS8Q8N3P4 Y_RNA.62-201ENST00000362840 99 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 Y_RNA.112-201ENST00000363250 102 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 MIR548J-201ENST00000408833 112 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 VN1R36P-201ENST00000414936 291 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 Z80107.1-201ENST00000436830 412 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 AL353689.1-201ENST00000438895 199 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 RPS4XP11-201ENST00000446897 772 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.49□□□□□ -2.17
VPS8Q8N3P4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.49□□□□□ -2.17
VPS8Q8N3P4 OR5AL2P-201ENST00000532185 920 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.49□□□□□ -2.17
VPS8Q8N3P4 AC068135.2-201ENST00000569293 1028 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.49□□□□□ -2.17
VPS8Q8N3P4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.49□□□□□ -2.17
VPS8Q8N3P4 MIR4299-201ENST00000577899 72 ntBASIC1.49□□□□□ -2.17
VPS8Q8N3P4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.49□□□□□ -2.17
VPS8Q8N3P4 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS8Q8N3P4 AC111188.2-201ENST00000529697 1387 ntBASIC1.48□□□□□ -2.17
VPS8Q8N3P4 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
VPS8Q8N3P4 MIR7-2-201ENST00000384970 110 ntBASIC1.48□□□□□ -2.17
VPS8Q8N3P4 RNA5SP465-201ENST00000391195 109 ntBASIC1.48□□□□□ -2.17
VPS8Q8N3P4 RNU2-41P-201ENST00000410991 178 ntBASIC1.48□□□□□ -2.17
VPS8Q8N3P4 HMGN1P14-201ENST00000412459 517 ntBASIC1.48□□□□□ -2.17
VPS8Q8N3P4 AC098614.2-201ENST00000426040 255 ntBASIC1.48□□□□□ -2.17
VPS8Q8N3P4 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.48□□□□□ -2.17
VPS8Q8N3P4 RNA5SP220-201ENST00000516298 104 ntBASIC1.48□□□□□ -2.17
VPS8Q8N3P4 RNU6-113P-201ENST00000516653 101 ntBASIC1.48□□□□□ -2.17
VPS8Q8N3P4 SNORA31.16-201ENST00000516773 139 ntBASIC1.48□□□□□ -2.17
VPS8Q8N3P4 AC016957.1-201ENST00000534895 309 ntBASIC1.48□□□□□ -2.17
VPS8Q8N3P4 MIR5571-201ENST00000577998 113 ntBASIC1.48□□□□□ -2.17
VPS8Q8N3P4 AC025588.2-201ENST00000604851 466 ntBASIC1.48□□□□□ -2.17
VPS8Q8N3P4 AC007038.2-201ENST00000608095 740 ntBASIC1.48□□□□□ -2.17
VPS8Q8N3P4 LINC00216-201ENST00000623548 1126 ntBASIC1.48□□□□□ -2.17
VPS8Q8N3P4 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
VPS8Q8N3P4 RNU6-1074P-201ENST00000383995 104 ntBASIC1.47□□□□□ -2.17
VPS8Q8N3P4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms