Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC006270.3-201ENST00000605967 1036 ntBASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 AC093838.1-201ENST00000613014 469 ntBASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 AC099786.3-201ENST00000565735 1410 ntBASIC2.24□□□□□ -2.05
CDKL3Q8IVW4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 SNORA3A-201ENST00000364113 130 ntBASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 BTF3P7-201ENST00000407097 488 ntBASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 USP9YP27-201ENST00000418455 438 ntBASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 AC005005.2-201ENST00000420779 380 ntBASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 RPS25P9-201ENST00000435591 252 ntBASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 MTND1P31-201ENST00000449206 961 ntBASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 MEMO1P3-201ENST00000459811 302 ntBASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 AC107626.1-201ENST00000471084 183 ntBASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 AC109486.1-201ENST00000486833 374 ntBASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 AC108729.1-201ENST00000487812 947 ntBASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 UBE2V1P12-201ENST00000503954 474 ntBASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 AL132857.1-201ENST00000555180 708 ntBASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 AC009712.1-201ENST00000564938 316 ntBASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 AL121917.1-203ENST00000605534 577 ntBASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 AC245297.2-201ENST00000610119 565 ntBASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 AC009090.3-201ENST00000616553 565 ntBASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CDKL3Q8IVW4 AC006020.1-201ENST00000420179 1854 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 ZNF658B-202ENST00000615961 3375 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 AL161781.1-201ENST00000354277 403 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 RNU6-97P-201ENST00000363387 104 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 RNU1-91P-201ENST00000364746 163 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 RNU6-1207P-201ENST00000384343 107 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 RNU6-1242P-201ENST00000391052 103 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 SNORD23.1-201ENST00000408212 104 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 U3.40-201ENST00000408706 208 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 RNA5SP508-201ENST00000411327 119 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 MTCYBP38-201ENST00000417160 1123 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 OOSP1P1-201ENST00000423265 274 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 MTCO2P23-201ENST00000425216 680 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 ZYG11AP1-201ENST00000430329 837 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 USP9YP24-201ENST00000434374 697 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 AL049734.2-201ENST00000441066 616 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 BNIP3P2-201ENST00000441221 577 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 USP9YP17-201ENST00000444617 696 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 SNORD121B-201ENST00000458838 81 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 HMGB1P36-201ENST00000487709 576 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 AC022634.1-201ENST00000520765 532 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 SNORD53-201ENST00000579969 78 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 AL353997.4-201ENST00000586196 166 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 AL136370.1-201ENST00000608166 691 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 AC006386.1-201ENST00000619436 415 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 CKAP2P1-201ENST00000555477 2049 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 CCT4P2-201ENST00000233836 1548 ntBASIC2.22□□□□□ -2.05
CDKL3Q8IVW4 AC011477.1-204ENST00000623416 1325 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 ZNF29P-201ENST00000225587 168 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 RNU5E-8P-201ENST00000363502 116 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 RNU4-92P-201ENST00000363783 136 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 RNU6-289P-201ENST00000364093 107 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 RNU6-359P-201ENST00000365466 108 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 USP9YP33-201ENST00000412220 421 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 NPM1P11-201ENST00000417106 855 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AC008850.1-201ENST00000427546 362 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 USP9YP35-201ENST00000435696 412 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 SDR42E1P3-201ENST00000438345 502 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 PIGFP3-201ENST00000441918 722 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 CBWD4P-201ENST00000445695 655 ntBASIC2.21□□□□□ -2.06
CDKL3Q8IVW4 EEF1E1P1-201ENST00000446998 430 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms