Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.96□□□□□ -1.62
NPAS4Q8IUM7 AC090740.1-201ENST00000623193 2262 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 AC138393.1-203ENST00000327086 343 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 Y_RNA.252-201ENST00000364556 101 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 RNU6-1329P-201ENST00000365664 107 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 RNU4-6P-201ENST00000410804 122 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 AC011933.1-201ENST00000413334 321 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 EIF4EP1-201ENST00000422311 642 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 AL590632.1-201ENST00000424289 371 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 AL627311.1-201ENST00000431514 115 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 NDUFB4P6-201ENST00000436819 366 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 NUTF2P3-201ENST00000448540 384 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 AC245028.2-201ENST00000458673 253 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 RN7SL98P-201ENST00000462271 300 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 RPS4XP13-201ENST00000483219 789 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 AC021146.3-201ENST00000511911 260 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 FTH1P9-201ENST00000513251 355 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 RNA5SP497-201ENST00000516081 97 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 AC009812.2-201ENST00000517657 457 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 AC134698.5-201ENST00000519444 336 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 AL359219.2-201ENST00000555184 348 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 AC005357.1-201ENST00000588399 301 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 IPO5P1-202ENST00000600039 287 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 AL445567.2-201ENST00000618935 498 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 AC048347.1-201ENST00000624621 427 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 NCAPGP1-201ENST00000505112 1814 ntBASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.95□□□□□ -1.62
NPAS4Q8IUM7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 AC104623.2-202ENST00000623477 4002 ntBASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 Y_RNA.455-201ENST00000384230 98 ntBASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 Y_RNA.473-201ENST00000384333 102 ntBASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 Y_RNA.623-201ENST00000411128 95 ntBASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 CYCSP33-201ENST00000414485 327 ntBASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 DPH3P2-201ENST00000422618 250 ntBASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 UBE2D3P2-201ENST00000424409 445 ntBASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 AL512844.2-201ENST00000433990 593 ntBASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 GSTA11P-201ENST00000452866 669 ntBASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 CEACAMP4-201ENST00000457676 421 ntBASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 AC026402.1-201ENST00000513642 170 ntBASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 RNU6-1282P-201ENST00000516735 96 ntBASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 PRR13P7-201ENST00000605538 430 ntBASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 AC011890.2-201ENST00000613393 294 ntBASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 PLCE1P1-201ENST00000622094 305 ntBASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 ADAM24P-201ENST00000398655 2101 ntBASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
NPAS4Q8IUM7 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 AP000542.2-201ENST00000623199 6179 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 AC118273.1-201ENST00000525324 3006 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 RNU1-108P-201ENST00000362556 161 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 RNA5SP388-201ENST00000362584 119 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 RNA5SP28-201ENST00000363841 119 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 Y_RNA.307-201ENST00000365022 117 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 Y_RNA.496-201ENST00000384444 101 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 MIR708-201ENST00000390708 88 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 Y_RNA.645-201ENST00000391229 102 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 AL445529.1-201ENST00000398713 389 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 AL022722.2-201ENST00000402519 180 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 RN7SKP27-201ENST00000410684 333 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 TMEM167AP1-201ENST00000423409 219 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 RPS12P10-201ENST00000427031 377 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 AC093151.1-201ENST00000427711 313 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 RPS6P12-201ENST00000432491 726 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 SNRPEP9-201ENST00000436794 238 ntBASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.93□□□□□ -1.62
NPAS4Q8IUM7 PHBP16-201ENST00000446318 950 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms