Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHFQ7M4L6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.19□□□□□ -1.9
SHFQ7M4L6 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHFQ7M4L6 RNU6-288P-201ENST00000363690 104 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 Y_RNA.303-201ENST00000364998 94 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 RNA5SP283-201ENST00000365604 119 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 RNU6-817P-201ENST00000391083 104 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 FGF7P8-201ENST00000402994 292 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 PPIAP31-201ENST00000405422 495 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 RNA5SP129-201ENST00000410276 118 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 Z85995.1-201ENST00000415547 335 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 CRYBB2P1-203ENST00000415709 538 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 AC068533.1-201ENST00000418542 415 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.19□□□□□ -1.9
SHFQ7M4L6 AL109913.1-201ENST00000421173 514 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 AL139413.1-201ENST00000421309 217 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.19□□□□□ -1.9
SHFQ7M4L6 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.19□□□□□ -1.9
SHFQ7M4L6 OR4C10P-201ENST00000434991 931 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 MTCO3P18-201ENST00000440206 761 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.19□□□□□ -1.9
SHFQ7M4L6 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.19□□□□□ -1.9
SHFQ7M4L6 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.19□□□□□ -1.9
SHFQ7M4L6 FABP5P13-201ENST00000452144 328 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 AL133162.1-201ENST00000463228 453 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 RN7SL442P-201ENST00000473804 320 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 EIF4EP3-201ENST00000498782 656 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 AC117522.3-201ENST00000507974 584 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.19□□□□□ -1.9
SHFQ7M4L6 AC074344.1-201ENST00000512823 224 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.19□□□□□ -1.9
SHFQ7M4L6 Y_RNA.689-201ENST00000516589 107 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 RNA5SP468-201ENST00000516782 93 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 RNU6-685P-201ENST00000517088 95 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 AC118273.2-201ENST00000532092 465 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.19□□□□□ -1.9
SHFQ7M4L6 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.19□□□□□ -1.9
SHFQ7M4L6 TRAV37-201ENST00000553906 342 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 AP005205.1-201ENST00000563503 508 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 AL138976.2-201ENST00000563989 694 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 AC087499.8-201ENST00000578406 226 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 MIR548S-201ENST00000581352 82 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 AC060780.3-201ENST00000589464 80 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 AC007687.1-201ENST00000602704 304 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 AC174048.1-201ENST00000603389 144 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 RNU1-30P-201ENST00000606575 163 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 AC006023.2-201ENST00000609916 167 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 DISC2.1-201ENST00000612827 205 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 AC130324.3-201ENST00000614165 542 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 MIR8058-201ENST00000615737 89 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
SHFQ7M4L6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.19□□□□□ -1.9
SHFQ7M4L6 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHFQ7M4L6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.19□□□□□ -1.9
SHFQ7M4L6 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHFQ7M4L6 AL513302.2-201ENST00000562313 1842 ntBASIC3.19□□□□□ -1.9
SHFQ7M4L6 AC058791.1-201ENST00000608412 3198 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHFQ7M4L6 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHFQ7M4L6 CASC19-280ENST00000642102 1351 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SHFQ7M4L6 AC126755.2-208ENST00000327792 462 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 AC138969.1-213ENST00000331436 462 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 RNU6-805P-201ENST00000365643 106 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 DEFB109C-201ENST00000382575 264 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 DEFB109B-201ENST00000382656 264 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 SNORA56-201ENST00000383966 129 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 RNU6-190P-201ENST00000384154 102 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 RNU6-550P-201ENST00000391057 101 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 HSPE1P26-201ENST00000405341 275 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 MIR1290-201ENST00000408735 78 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 RNU2-29P-201ENST00000410423 189 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 Y_RNA.604-201ENST00000410574 102 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 RNU6-387P-201ENST00000411331 105 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.18□□□□□ -1.9
SHFQ7M4L6 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.18□□□□□ -1.9
SHFQ7M4L6 AC245054.1-201ENST00000420944 258 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.18□□□□□ -1.9
SHFQ7M4L6 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.18□□□□□ -1.9
SHFQ7M4L6 CALM1P1-201ENST00000442082 433 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.18□□□□□ -1.9
SHFQ7M4L6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.18□□□□□ -1.9
SHFQ7M4L6 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.18□□□□□ -1.9
SHFQ7M4L6 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.18□□□□□ -1.9
SHFQ7M4L6 MIR2276-201ENST00000516886 89 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 RNU6-677P-201ENST00000516914 101 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.18□□□□□ -1.9
SHFQ7M4L6 IGKV2D-19-201ENST00000523346 262 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.18□□□□□ -1.9
SHFQ7M4L6 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.18□□□□□ -1.9
SHFQ7M4L6 AC026333.2-201ENST00000542164 106 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.18□□□□□ -1.9
SHFQ7M4L6 HSPE1P5-201ENST00000561489 272 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 MIR4700-201ENST00000578311 74 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.18□□□□□ -1.9
SHFQ7M4L6 AC002545.1-201ENST00000592511 181 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.18□□□□□ -1.9
SHFQ7M4L6 AC013553.2-201ENST00000604244 589 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 AL590392.1-201ENST00000604960 446 ntBASIC3.18□□□□□ -1.9
SHFQ7M4L6 AC034102.8-201ENST00000615146 484 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms