Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC004812.1-201ENST00000540773 146 ntBASIC0.53□□□□□ -2.32
VPS13CQ709C8 CYP4A27P-201ENST00000567218 190 ntBASIC0.53□□□□□ -2.32
VPS13CQ709C8 AC091812.1-201ENST00000432235 1948 ntBASIC0.53□□□□□ -2.32
VPS13CQ709C8 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.53□□□□□ -2.32
VPS13CQ709C8 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC0.53□□□□□ -2.32
VPS13CQ709C8 AC018437.1-201ENST00000492214 406 ntBASIC0.53□□□□□ -2.32
VPS13CQ709C8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.53□□□□□ -2.32
VPS13CQ709C8 AL118508.4-201ENST00000624142 1176 ntBASIC0.53□□□□□ -2.32
VPS13CQ709C8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
VPS13CQ709C8 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.53□□□□□ -2.32
VPS13CQ709C8 SNORA46.1-201ENST00000391069 153 ntBASIC0.53□□□□□ -2.33
VPS13CQ709C8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.53□□□□□ -2.33
VPS13CQ709C8 AP003485.1-201ENST00000625093 753 ntBASIC0.53□□□□□ -2.33
VPS13CQ709C8 AL442644.1-201ENST00000454390 3105 ntBASIC0.52□□□□□ -2.33
VPS13CQ709C8 RPS27P23-201ENST00000487608 251 ntBASIC0.52□□□□□ -2.33
VPS13CQ709C8 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.52□□□□□ -2.33
VPS13CQ709C8 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.52□□□□□ -2.33
VPS13CQ709C8 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.52□□□□□ -2.33
VPS13CQ709C8 FAM106CP-201ENST00000582212 507 ntBASIC0.52□□□□□ -2.33
VPS13CQ709C8 RPL21P136-201ENST00000605378 396 ntBASIC0.52□□□□□ -2.33
VPS13CQ709C8 AC106052.1-201ENST00000608029 497 ntBASIC0.52□□□□□ -2.33
VPS13CQ709C8 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.52□□□□□ -2.33
VPS13CQ709C8 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.52□□□□□ -2.33
VPS13CQ709C8 AP000567.1-201ENST00000406413 156 ntBASIC0.52□□□□□ -2.33
VPS13CQ709C8 AL591043.1-201ENST00000432461 424 ntBASIC0.52□□□□□ -2.33
VPS13CQ709C8 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.52□□□□□ -2.33
VPS13CQ709C8 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.52□□□□□ -2.33
VPS13CQ709C8 Y_RNA.132-201ENST00000363421 102 ntBASIC0.52□□□□□ -2.33
VPS13CQ709C8 SNORD114-15-201ENST00000364687 72 ntBASIC0.52□□□□□ -2.33
VPS13CQ709C8 RNY3-201ENST00000365484 102 ntBASIC0.52□□□□□ -2.33
VPS13CQ709C8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.52□□□□□ -2.33
VPS13CQ709C8 HSFY3P-201ENST00000444242 1191 ntBASIC0.52□□□□□ -2.33
VPS13CQ709C8 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.52□□□□□ -2.33
VPS13CQ709C8 KLF3P2-201ENST00000465138 268 ntBASIC0.52□□□□□ -2.33
VPS13CQ709C8 AC110491.1-201ENST00000562191 2010 ntBASIC0.52□□□□□ -2.33
VPS13CQ709C8 AL157700.1-201ENST00000561973 1432 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 Y_RNA.571-201ENST00000384753 98 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 AL356379.1-201ENST00000414105 126 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC0.51□□□□□ -2.33
VPS13CQ709C8 KLRA1P-201ENST00000503499 986 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 AC098591.2-201ENST00000510152 315 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 RNA5SP471-201ENST00000516971 106 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.51□□□□□ -2.33
VPS13CQ709C8 AC008269.2-201ENST00000561915 1105 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 AL022718.1-201ENST00000412004 84 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 AC092447.6-201ENST00000414578 210 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 PMCHL2-203ENST00000457791 237 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.51□□□□□ -2.33
VPS13CQ709C8 AC091435.1-201ENST00000505442 584 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 AL078605.1-201ENST00000603529 500 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 MTRNR2L2-201ENST00000604882 87 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 AL162373.1-201ENST00000620433 407 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 AL356057.2-201ENST00000403318 432 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 RNU4-72P-201ENST00000410754 173 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 VN1R42P-201ENST00000424651 344 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.51□□□□□ -2.33
VPS13CQ709C8 PABPC1P3-201ENST00000469174 459 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 AC005741.1-201ENST00000511094 432 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 SNORD59.2-201ENST00000516873 68 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 AC010735.1-201ENST00000567305 1026 ntBASIC0.51□□□□□ -2.33
VPS13CQ709C8 AC105252.1-201ENST00000503089 286 ntBASIC0.5□□□□□ -2.33
VPS13CQ709C8 CDC42P4-201ENST00000510507 563 ntBASIC0.5□□□□□ -2.33
VPS13CQ709C8 MIR6718-201ENST00000616153 80 ntBASIC0.5□□□□□ -2.33
VPS13CQ709C8 AL136520.1-201ENST00000600311 1322 ntBASIC0.5□□□□□ -2.33
VPS13CQ709C8 AL158823.1-201ENST00000418441 478 ntBASIC0.5□□□□□ -2.33
VPS13CQ709C8 AC118469.1-201ENST00000442943 488 ntBASIC0.5□□□□□ -2.33
VPS13CQ709C8 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.5□□□□□ -2.33
VPS13CQ709C8 AL035666.1-201ENST00000446195 348 ntBASIC0.5□□□□□ -2.33
VPS13CQ709C8 RPS27P21-201ENST00000486977 252 ntBASIC0.5□□□□□ -2.33
VPS13CQ709C8 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.5□□□□□ -2.33
VPS13CQ709C8 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.5□□□□□ -2.33
VPS13CQ709C8 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.5□□□□□ -2.33
VPS13CQ709C8 AP006248.3-201ENST00000623580 594 ntBASIC0.5□□□□□ -2.33
VPS13CQ709C8 MTCO1P23-201ENST00000415223 1526 ntBASIC0.5□□□□□ -2.33
VPS13CQ709C8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
VPS13CQ709C8 ZNF702P-202ENST00000434269 1966 ntBASIC0.5□□□□□ -2.33
VPS13CQ709C8 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
VPS13CQ709C8 Y_RNA.457-201ENST00000384237 111 ntBASIC0.5□□□□□ -2.33
VPS13CQ709C8 PTGES3P2-201ENST00000407942 482 ntBASIC0.5□□□□□ -2.33
VPS13CQ709C8 AC092648.1-201ENST00000425870 423 ntBASIC0.5□□□□□ -2.33
VPS13CQ709C8 MTND5P15-201ENST00000434246 349 ntBASIC0.5□□□□□ -2.33
VPS13CQ709C8 LINC00557-201ENST00000563184 1279 ntBASIC0.5□□□□□ -2.33
VPS13CQ709C8 AC113368.1-201ENST00000603736 382 ntBASIC0.5□□□□□ -2.33
VPS13CQ709C8 MIR6866-201ENST00000638146 69 ntBASIC0.5□□□□□ -2.33
VPS13CQ709C8 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.5□□□□□ -2.33
VPS13CQ709C8 SFR1P1-201ENST00000403720 688 ntBASIC0.49□□□□□ -2.33
VPS13CQ709C8 SNORD56-201ENST00000413522 71 ntBASIC0.49□□□□□ -2.33
VPS13CQ709C8 SDAD1P3-201ENST00000427380 333 ntBASIC0.49□□□□□ -2.33
VPS13CQ709C8 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
VPS13CQ709C8 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
VPS13CQ709C8 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
VPS13CQ709C8 OR4G2P-201ENST00000328113 903 ntBASIC0.49□□□□□ -2.33
VPS13CQ709C8 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.49□□□□□ -2.33
VPS13CQ709C8 SNRPGP12-201ENST00000449481 213 ntBASIC0.49□□□□□ -2.33
VPS13CQ709C8 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS13CQ709C8 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS13CQ709C8 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS13CQ709C8 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.49□□□□□ -2.33
VPS13CQ709C8 AC109809.1-201ENST00000619665 545 ntBASIC0.49□□□□□ -2.33
VPS13CQ709C8 RNU6-1164P-201ENST00000364428 107 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms