Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 SUMO1P1-201ENST00000497904 306 ntBASIC1.56□□□□□ -2.16
CCDC171Q6TFL3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.56□□□□□ -2.16
CCDC171Q6TFL3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CCDC171Q6TFL3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.56□□□□□ -2.16
CCDC171Q6TFL3 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC171Q6TFL3 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.56□□□□□ -2.16
CCDC171Q6TFL3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 SNORA40.6-201ENST00000391153 128 ntBASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 AL590084.1-201ENST00000407885 387 ntBASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 RNU6-1328P-201ENST00000410938 106 ntBASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 USP9YP6-201ENST00000413550 854 ntBASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 AC015922.2-201ENST00000435593 184 ntBASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 AC021146.2-201ENST00000504736 556 ntBASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 RNU6-1095P-201ENST00000516148 108 ntBASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 RNU6-798P-201ENST00000516912 103 ntBASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 LINC00933-203ENST00000559812 219 ntBASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 AC243960.4-201ENST00000600532 288 ntBASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 AC006338.1-201ENST00000618453 749 ntBASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 AC018926.3-201ENST00000618841 406 ntBASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 AP003400.5-201ENST00000624827 617 ntBASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 AC009950.2-201ENST00000636548 183 ntBASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CCDC171Q6TFL3 AC025263.3-201ENST00000622965 1396 ntBASIC1.54□□□□□ -2.16
CCDC171Q6TFL3 RNU1-148P-201ENST00000384472 162 ntBASIC1.54□□□□□ -2.16
CCDC171Q6TFL3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC171Q6TFL3 AL009174.1-201ENST00000426577 416 ntBASIC1.54□□□□□ -2.16
CCDC171Q6TFL3 FO393419.3-201ENST00000428741 282 ntBASIC1.54□□□□□ -2.16
CCDC171Q6TFL3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC171Q6TFL3 AC118469.1-201ENST00000442943 488 ntBASIC1.54□□□□□ -2.16
CCDC171Q6TFL3 HSPE1P24-201ENST00000450782 238 ntBASIC1.54□□□□□ -2.16
CCDC171Q6TFL3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.54□□□□□ -2.16
CCDC171Q6TFL3 TOMM22P6-201ENST00000465035 409 ntBASIC1.54□□□□□ -2.16
CCDC171Q6TFL3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.54□□□□□ -2.16
CCDC171Q6TFL3 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CCDC171Q6TFL3 RNU5F-8P-201ENST00000515941 111 ntBASIC1.54□□□□□ -2.16
CCDC171Q6TFL3 MIR3921-201ENST00000577308 85 ntBASIC1.54□□□□□ -2.16
CCDC171Q6TFL3 BNIP3P8-201ENST00000597863 560 ntBASIC1.54□□□□□ -2.16
CCDC171Q6TFL3 AC007038.2-201ENST00000608095 740 ntBASIC1.54□□□□□ -2.16
CCDC171Q6TFL3 AC093838.1-201ENST00000613014 469 ntBASIC1.54□□□□□ -2.16
CCDC171Q6TFL3 AC091304.6-201ENST00000619761 202 ntBASIC1.54□□□□□ -2.16
CCDC171Q6TFL3 AC111188.2-201ENST00000529697 1387 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 RNU6-670P-201ENST00000364312 104 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 AC016769.3-201ENST00000396562 315 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 RN7SKP158-201ENST00000410453 326 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 OR9R1P-201ENST00000412200 877 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 AL121601.2-201ENST00000438019 707 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 AP000949.1-201ENST00000438328 629 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 RPL21P134-201ENST00000453468 483 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 AC005410.1-202ENST00000460347 485 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 AC104164.3-201ENST00000467363 1258 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 RPL31P60-201ENST00000478450 367 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 AC027575.1-201ENST00000481064 460 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 AC107032.1-201ENST00000485945 480 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 AC084033.1-201ENST00000550830 633 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 CBX3P2-202ENST00000583365 535 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 AC098848.2-201ENST00000588023 330 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 MIR6078-201ENST00000611069 100 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 AC021755.4-201ENST00000616620 456 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 AC040168.1-201ENST00000623594 991 ntBASIC1.53□□□□□ -2.16
CCDC171Q6TFL3 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.17
CCDC171Q6TFL3 MIR1290-201ENST00000408735 78 ntBASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 RNA5SP450-201ENST00000411206 102 ntBASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 UBE2V1P9-201ENST00000414760 368 ntBASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 Z85994.2-201ENST00000434327 452 ntBASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 MTND4LP10-201ENST00000435146 291 ntBASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 AC104073.1-201ENST00000451988 151 ntBASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 RPS20P24-201ENST00000457473 361 ntBASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 snoU109.4-201ENST00000458953 143 ntBASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 TPT1P8-201ENST00000510120 555 ntBASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 AL359273.1-201ENST00000510918 627 ntBASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 AC118273.2-201ENST00000532092 465 ntBASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 AC010186.2-204ENST00000537668 439 ntBASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 uc_338.12-201ENST00000616344 181 ntBASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 AP000560.1-201ENST00000624150 1937 ntBASIC1.52□□□□□ -2.17
CCDC171Q6TFL3 RNU6-441P-201ENST00000384545 106 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms