Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 UBE2V1P13-201ENST00000436983 439 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 AC093156.1-201ENST00000440382 670 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.53□□□□□ -2
ZNF544Q6NX49 AC025750.2-201ENST00000442609 450 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 MTCO1P19-201ENST00000443487 500 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 AC234775.1-201ENST00000454247 670 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.53□□□□□ -2
ZNF544Q6NX49 SNORD42A-201ENST00000459584 64 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.53□□□□□ -2
ZNF544Q6NX49 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.53□□□□□ -2
ZNF544Q6NX49 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.53□□□□□ -2
ZNF544Q6NX49 AC117522.3-201ENST00000507974 584 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 AC091965.2-201ENST00000512324 613 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.53□□□□□ -2
ZNF544Q6NX49 AC022447.1-201ENST00000515358 464 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 RNA5SP367-201ENST00000516557 118 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 MTND4LP18-201ENST00000526864 291 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.53□□□□□ -2
ZNF544Q6NX49 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.53□□□□□ -2
ZNF544Q6NX49 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.53□□□□□ -2
ZNF544Q6NX49 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.53□□□□□ -2
ZNF544Q6NX49 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.53□□□□□ -2
ZNF544Q6NX49 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.53□□□□□ -2
ZNF544Q6NX49 ZNF519P3-201ENST00000557158 1032 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.53□□□□□ -2
ZNF544Q6NX49 MIR548AB-201ENST00000584917 84 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 AC005771.1-201ENST00000585581 349 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.53□□□□□ -2
ZNF544Q6NX49 AP001429.1-201ENST00000602568 530 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 AC015871.2-201ENST00000603605 948 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 AC112191.3-201ENST00000604371 277 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 AC239868.4-201ENST00000608318 671 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 AC104237.2-201ENST00000612456 443 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 AC090582.1-201ENST00000636321 199 ntBASIC2.53□□□□□ -2
ZNF544Q6NX49 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.53□□□□□ -2
ZNF544Q6NX49 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.53□□□□□ -2
ZNF544Q6NX49 RNU5F-7P-201ENST00000363696 115 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 SNORA5B-201ENST00000363786 132 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 RNU6-1180P-201ENST00000364935 107 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 SNORA75-201ENST00000384158 137 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 RNU6-809P-201ENST00000384461 107 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 RNU6-114P-201ENST00000384704 105 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 RNA5SP181-201ENST00000410246 98 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 Y_RNA.598-201ENST00000410480 95 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 RNU6-248P-201ENST00000410720 107 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 HMGN1P14-201ENST00000412459 517 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 CCDC58P2-201ENST00000417131 366 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AC006366.1-201ENST00000422002 759 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.52□□□□□ -2.01
ZNF544Q6NX49 CR769767.1-201ENST00000436337 346 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 RPS24P13-201ENST00000442520 397 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 USP9YP29-201ENST00000445112 563 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.52□□□□□ -2.01
ZNF544Q6NX49 USP9YP12-201ENST00000450481 570 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AL590365.1-201ENST00000450788 243 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 SSXP1-201ENST00000453640 473 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.52□□□□□ -2.01
ZNF544Q6NX49 RNU6-956P-201ENST00000458868 103 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 RPL23AP41-201ENST00000484754 458 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AC055855.1-201ENST00000489563 579 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AC079140.3-201ENST00000511111 550 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AC022483.1-201ENST00000514020 567 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AC026801.2-201ENST00000515352 425 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AP003467.2-201ENST00000520175 319 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AC128657.1-201ENST00000549459 145 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AC119751.7-201ENST00000600494 245 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AL355472.4-201ENST00000610233 626 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 BX664608.1-201ENST00000610519 487 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 TUG1_1.1-201ENST00000610654 145 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AC108479.2-201ENST00000617314 601 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AL360181.4-201ENST00000621752 134 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 AC009268.2-201ENST00000621925 457 ntBASIC2.52□□□□□ -2.01
ZNF544Q6NX49 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ZNF544Q6NX49 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ZNF544Q6NX49 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
ZNF544Q6NX49 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.51□□□□□ -2.01
ZNF544Q6NX49 TAB3P1-202ENST00000452645 1634 ntBASIC2.51□□□□□ -2.01
ZNF544Q6NX49 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
ZNF544Q6NX49 RNU6-623P-201ENST00000363143 105 ntBASIC2.51□□□□□ -2.01
ZNF544Q6NX49 Y_RNA.194-201ENST00000363985 102 ntBASIC2.51□□□□□ -2.01
ZNF544Q6NX49 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
ZNF544Q6NX49 SNORD116-4-201ENST00000384733 96 ntBASIC2.51□□□□□ -2.01
ZNF544Q6NX49 CDK8P2-201ENST00000415020 547 ntBASIC2.51□□□□□ -2.01
ZNF544Q6NX49 USP9YP13-201ENST00000417797 480 ntBASIC2.51□□□□□ -2.01
ZNF544Q6NX49 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF544Q6NX49 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.51□□□□□ -2.01
ZNF544Q6NX49 DUTP6-201ENST00000425573 462 ntBASIC2.51□□□□□ -2.01
ZNF544Q6NX49 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms