Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 AC087045.1-201ENST00000605856 382 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 MIR6857-201ENST00000613267 93 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 AC004808.1-201ENST00000627671 721 ntBASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.54□□□□□ -2.32
VPS13DQ5THJ4 RNU6-716P-201ENST00000365621 103 ntBASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 AL161449.1-201ENST00000414531 1199 ntBASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 RPL30P5-201ENST00000494923 336 ntBASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 MTND4P31-201ENST00000425607 1343 ntBASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 AC091812.1-201ENST00000432235 1948 ntBASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 ARL5AP2-201ENST00000444698 533 ntBASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 NF1P3-201ENST00000457709 450 ntBASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 PCNAP1-201ENST00000505363 709 ntBASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 AC005034.5-201ENST00000604219 466 ntBASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 AC091925.1-201ENST00000623204 462 ntBASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 MIR934-201ENST00000401241 83 ntBASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 AL139397.2-201ENST00000404529 772 ntBASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 XKRYP1-201ENST00000423438 492 ntBASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 XKRYP2-201ENST00000432915 492 ntBASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 RPS20P10-201ENST00000451209 253 ntBASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 RPL26P9-201ENST00000457466 433 ntBASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 AC109454.4-201ENST00000623411 649 ntBASIC0.53□□□□□ -2.32
VPS13DQ5THJ4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC0.53□□□□□ -2.33
VPS13DQ5THJ4 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 Y_RNA.471-201ENST00000384312 102 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 CIR1P3-201ENST00000405137 479 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 RPL39P28-201ENST00000465655 155 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 SNORA31.25-201ENST00000517242 134 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 OR6C73P-201ENST00000546432 358 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 AC011472.4-201ENST00000615848 491 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 AC024595.1-201ENST00000623088 387 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 AC008555.8-201ENST00000623602 2168 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 MTND4LP13-201ENST00000425022 298 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 SNORA31.20-201ENST00000517111 133 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 AC104997.1-201ENST00000519761 717 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 DPRXP5-201ENST00000604662 539 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 AL627230.6-201ENST00000611129 280 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 ZNF519P1-201ENST00000449011 1626 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 RNU4-42P-201ENST00000364738 142 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 RPL30P3-201ENST00000424262 333 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 AL356432.1-201ENST00000405809 419 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 RNA5SP450-201ENST00000411206 102 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 ARL2BPP3-201ENST00000421226 480 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 FAM60BP-201ENST00000578364 658 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 AC138473.1-201ENST00000605717 526 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 AL355472.4-201ENST00000610233 626 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 MIR6759-201ENST00000638110 65 ntBASIC0.52□□□□□ -2.33
VPS13DQ5THJ4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.51□□□□□ -2.33
VPS13DQ5THJ4 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.51□□□□□ -2.33
VPS13DQ5THJ4 AC084033.1-201ENST00000550830 633 ntBASIC0.51□□□□□ -2.33
VPS13DQ5THJ4 AC106791.2-201ENST00000604680 391 ntBASIC0.51□□□□□ -2.33
VPS13DQ5THJ4 RNU6-942P-201ENST00000363002 107 ntBASIC0.51□□□□□ -2.33
VPS13DQ5THJ4 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.51□□□□□ -2.33
VPS13DQ5THJ4 AC146507.1-201ENST00000468335 354 ntBASIC0.51□□□□□ -2.33
VPS13DQ5THJ4 AC096745.1-201ENST00000509945 370 ntBASIC0.51□□□□□ -2.33
VPS13DQ5THJ4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.51□□□□□ -2.33
VPS13DQ5THJ4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.51□□□□□ -2.33
VPS13DQ5THJ4 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.51□□□□□ -2.33
VPS13DQ5THJ4 AC007742.2-201ENST00000618226 398 ntBASIC0.51□□□□□ -2.33
VPS13DQ5THJ4 AP003485.1-201ENST00000625093 753 ntBASIC0.51□□□□□ -2.33
VPS13DQ5THJ4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
VPS13DQ5THJ4 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.51□□□□□ -2.33
VPS13DQ5THJ4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC0.51□□□□□ -2.33
VPS13DQ5THJ4 AC023824.2-201ENST00000566185 400 ntBASIC0.51□□□□□ -2.33
VPS13DQ5THJ4 AL356473.1-201ENST00000406203 1408 ntBASIC0.51□□□□□ -2.33
VPS13DQ5THJ4 RNU2-70P-201ENST00000410718 179 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 AC093155.1-201ENST00000440164 826 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 AC117503.1-201ENST00000472241 394 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 CABYRP1-201ENST00000465493 1045 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 FAM206BP-201ENST00000510179 541 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 AP003476.1-201ENST00000623984 516 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 NACAP2-201ENST00000318548 624 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 Y_RNA.280-201ENST00000364765 112 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 MTND2P2-201ENST00000434633 945 ntBASIC0.5□□□□□ -2.33
VPS13DQ5THJ4 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms