Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC58Q4VC31 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC58Q4VC31 AC093767.1-201ENST00000504523 156 ntBASIC1.3□□□□□ -2.2
CCDC58Q4VC31 RNU6-362P-201ENST00000516736 90 ntBASIC1.3□□□□□ -2.2
CCDC58Q4VC31 SNORA44.1-201ENST00000517031 108 ntBASIC1.3□□□□□ -2.2
CCDC58Q4VC31 RNA5SP165-201ENST00000517142 115 ntBASIC1.3□□□□□ -2.2
CCDC58Q4VC31 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
CCDC58Q4VC31 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CCDC58Q4VC31 AC124947.2-202ENST00000552735 133 ntBASIC1.3□□□□□ -2.2
CCDC58Q4VC31 YWHAZP1-201ENST00000556286 722 ntBASIC1.3□□□□□ -2.2
CCDC58Q4VC31 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC58Q4VC31 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CCDC58Q4VC31 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC58Q4VC31 AC092192.1-201ENST00000633154 1018 ntBASIC1.3□□□□□ -2.2
CCDC58Q4VC31 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.3□□□□□ -2.2
CCDC58Q4VC31 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
CCDC58Q4VC31 AC010889.1-201ENST00000566193 2666 ntBASIC1.29□□□□□ -2.2
CCDC58Q4VC31 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.29□□□□□ -2.2
CCDC58Q4VC31 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC58Q4VC31 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC58Q4VC31 ZNF29P-201ENST00000225587 168 ntBASIC1.29□□□□□ -2.2
CCDC58Q4VC31 RNU6-543P-201ENST00000362576 108 ntBASIC1.29□□□□□ -2.2
CCDC58Q4VC31 MIR518A2-201ENST00000384966 87 ntBASIC1.29□□□□□ -2.2
CCDC58Q4VC31 AL627390.1-201ENST00000396055 340 ntBASIC1.29□□□□□ -2.2
CCDC58Q4VC31 PNRC2P1-201ENST00000423940 420 ntBASIC1.29□□□□□ -2.2
CCDC58Q4VC31 HMGB1P18-201ENST00000438801 619 ntBASIC1.29□□□□□ -2.2
CCDC58Q4VC31 AC092393.1-201ENST00000439625 742 ntBASIC1.29□□□□□ -2.2
CCDC58Q4VC31 AC008379.1-201ENST00000463655 464 ntBASIC1.29□□□□□ -2.2
CCDC58Q4VC31 UBL5P3-201ENST00000475112 231 ntBASIC1.29□□□□□ -2.2
CCDC58Q4VC31 RPS29P21-201ENST00000496272 170 ntBASIC1.29□□□□□ -2.2
CCDC58Q4VC31 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC58Q4VC31 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.29□□□□□ -2.2
CCDC58Q4VC31 MIR3683-201ENST00000580847 82 ntBASIC1.29□□□□□ -2.2
CCDC58Q4VC31 MIMT1-201ENST00000597105 1050 ntBASIC1.29□□□□□ -2.2
CCDC58Q4VC31 AC079610.2-201ENST00000604818 690 ntBASIC1.29□□□□□ -2.2
CCDC58Q4VC31 MTND4LP5-201ENST00000605152 292 ntBASIC1.29□□□□□ -2.2
CCDC58Q4VC31 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.29□□□□□ -2.2
CCDC58Q4VC31 MIR8081-201ENST00000611533 95 ntBASIC1.29□□□□□ -2.2
CCDC58Q4VC31 MIR6130-201ENST00000619419 109 ntBASIC1.29□□□□□ -2.2
CCDC58Q4VC31 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC58Q4VC31 RNU5A-1-201ENST00000362698 116 ntBASIC1.28□□□□□ -2.2
CCDC58Q4VC31 U8.1-201ENST00000362843 134 ntBASIC1.28□□□□□ -2.2
CCDC58Q4VC31 MIR135A2-201ENST00000384854 100 ntBASIC1.28□□□□□ -2.2
CCDC58Q4VC31 ATP5F1P6-201ENST00000402768 767 ntBASIC1.28□□□□□ -2.2
CCDC58Q4VC31 ZNF92P1Y-201ENST00000415010 1191 ntBASIC1.28□□□□□ -2.2
CCDC58Q4VC31 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC58Q4VC31 Z82210.1-201ENST00000440037 231 ntBASIC1.28□□□□□ -2.2
CCDC58Q4VC31 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC58Q4VC31 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC58Q4VC31 RPS20P22-201ENST00000473700 357 ntBASIC1.28□□□□□ -2.2
CCDC58Q4VC31 SCARNA15.2-201ENST00000516409 127 ntBASIC1.28□□□□□ -2.2
CCDC58Q4VC31 RNU6-1256P-201ENST00000516539 103 ntBASIC1.28□□□□□ -2.2
CCDC58Q4VC31 snoZ278.1-201ENST00000517059 112 ntBASIC1.28□□□□□ -2.2
CCDC58Q4VC31 AK6P1-201ENST00000540219 478 ntBASIC1.28□□□□□ -2.2
CCDC58Q4VC31 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC58Q4VC31 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.28□□□□□ -2.2
CCDC58Q4VC31 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.28□□□□□ -2.2
CCDC58Q4VC31 AL161729.4-201ENST00000604650 476 ntBASIC1.28□□□□□ -2.2
CCDC58Q4VC31 AP001485.1-201ENST00000604799 199 ntBASIC1.28□□□□□ -2.2
CCDC58Q4VC31 AC007349.4-201ENST00000608114 532 ntBASIC1.28□□□□□ -2.2
CCDC58Q4VC31 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.28□□□□□ -2.2
CCDC58Q4VC31 AC091834.1-201ENST00000614543 472 ntBASIC1.28□□□□□ -2.2
CCDC58Q4VC31 AP003476.1-201ENST00000623984 516 ntBASIC1.28□□□□□ -2.2
CCDC58Q4VC31 AC005832.2-201ENST00000538921 1430 ntBASIC1.28□□□□□ -2.2
CCDC58Q4VC31 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.28□□□□□ -2.2
CCDC58Q4VC31 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CCDC58Q4VC31 SNORA40.19-201ENST00000390846 128 ntBASIC1.27□□□□□ -2.21
CCDC58Q4VC31 RNU2-63P-201ENST00000410792 194 ntBASIC1.27□□□□□ -2.21
CCDC58Q4VC31 RPS24P7-201ENST00000416921 246 ntBASIC1.27□□□□□ -2.21
CCDC58Q4VC31 BOLA3P4-201ENST00000418151 400 ntBASIC1.27□□□□□ -2.21
CCDC58Q4VC31 AC233981.1-201ENST00000423224 461 ntBASIC1.27□□□□□ -2.21
CCDC58Q4VC31 MED14P1-201ENST00000430517 648 ntBASIC1.27□□□□□ -2.21
CCDC58Q4VC31 AL512637.2-201ENST00000431287 1256 ntBASIC1.27□□□□□ -2.21
CCDC58Q4VC31 MTND2P29-201ENST00000438595 412 ntBASIC1.27□□□□□ -2.21
CCDC58Q4VC31 RPL26P9-201ENST00000457466 433 ntBASIC1.27□□□□□ -2.21
CCDC58Q4VC31 UBE2DNL-203ENST00000474922 222 ntBASIC1.27□□□□□ -2.21
CCDC58Q4VC31 SNORA25.15-201ENST00000516487 89 ntBASIC1.27□□□□□ -2.21
CCDC58Q4VC31 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CCDC58Q4VC31 RRN3P3-201ENST00000549207 578 ntBASIC1.27□□□□□ -2.21
CCDC58Q4VC31 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.27□□□□□ -2.21
CCDC58Q4VC31 AL391813.1-201ENST00000603098 260 ntBASIC1.27□□□□□ -2.21
CCDC58Q4VC31 AC024581.2-201ENST00000619986 252 ntBASIC1.27□□□□□ -2.21
CCDC58Q4VC31 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC1.27□□□□□ -2.21
CCDC58Q4VC31 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CCDC58Q4VC31 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CCDC58Q4VC31 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.26□□□□□ -2.21
CCDC58Q4VC31 MIR504-201ENST00000385065 83 ntBASIC1.26□□□□□ -2.21
CCDC58Q4VC31 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.26□□□□□ -2.21
CCDC58Q4VC31 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.26□□□□□ -2.21
CCDC58Q4VC31 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.26□□□□□ -2.21
CCDC58Q4VC31 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.26□□□□□ -2.21
CCDC58Q4VC31 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.26□□□□□ -2.21
CCDC58Q4VC31 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC58Q4VC31 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.26□□□□□ -2.21
CCDC58Q4VC31 MRPS33P3-201ENST00000513456 322 ntBASIC1.26□□□□□ -2.21
CCDC58Q4VC31 SNORA31.24-201ENST00000517232 57 ntBASIC1.26□□□□□ -2.21
CCDC58Q4VC31 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.26□□□□□ -2.21
CCDC58Q4VC31 AC004217.3-201ENST00000551552 878 ntBASIC1.26□□□□□ -2.21
CCDC58Q4VC31 IMMP1LP2-201ENST00000552954 492 ntBASIC1.26□□□□□ -2.21
CCDC58Q4VC31 AC091544.4-201ENST00000555268 342 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms