Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 RPS20P15-201ENST00000412792 311 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.13□□□□□ -1.75
SF3B3Q15393 PDCL2P1-201ENST00000419302 352 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.13□□□□□ -1.75
SF3B3Q15393 AL159169.1-201ENST00000421119 127 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 AL353705.1-201ENST00000433468 480 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 FTH1P1-201ENST00000437933 532 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.13□□□□□ -1.75
SF3B3Q15393 CACYBPP2-201ENST00000453625 678 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 AL356010.1-201ENST00000456364 102 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.13□□□□□ -1.75
SF3B3Q15393 SNORD121B-201ENST00000458838 81 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 AC109925.1-201ENST00000478069 331 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 AL049873.1-201ENST00000480540 376 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 AC233702.1-201ENST00000482905 502 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 AC020893.1-201ENST00000502452 580 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.13□□□□□ -1.75
SF3B3Q15393 APOOP4-201ENST00000513530 597 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.13□□□□□ -1.75
SF3B3Q15393 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.13□□□□□ -1.75
SF3B3Q15393 OR4R1P-201ENST00000529879 463 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.13□□□□□ -1.75
SF3B3Q15393 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.13□□□□□ -1.75
SF3B3Q15393 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.13□□□□□ -1.75
SF3B3Q15393 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.13□□□□□ -1.75
SF3B3Q15393 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.13□□□□□ -1.75
SF3B3Q15393 AC105224.1-201ENST00000587055 421 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.13□□□□□ -1.75
SF3B3Q15393 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SF3B3Q15393 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.13□□□□□ -1.75
SF3B3Q15393 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.13□□□□□ -1.75
SF3B3Q15393 AC006020.1-201ENST00000420179 1854 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.13□□□□□ -1.75
SF3B3Q15393 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.13□□□□□ -1.75
SF3B3Q15393 AL353743.1-202ENST00000431724 1695 ntBASIC4.13□□□□□ -1.75
SF3B3Q15393 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SF3B3Q15393 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SF3B3Q15393 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.12□□□□□ -1.75
SF3B3Q15393 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.12□□□□□ -1.75
SF3B3Q15393 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.12□□□□□ -1.75
SF3B3Q15393 Y_RNA.166-201ENST00000363730 102 ntBASIC4.12□□□□□ -1.75
SF3B3Q15393 SNORD81.2-201ENST00000365153 76 ntBASIC4.12□□□□□ -1.75
SF3B3Q15393 UBA52P6-201ENST00000399822 382 ntBASIC4.12□□□□□ -1.75
SF3B3Q15393 MTCO3P12-201ENST00000416718 547 ntBASIC4.12□□□□□ -1.75
SF3B3Q15393 CBWD4P-201ENST00000445695 655 ntBASIC4.12□□□□□ -1.75
SF3B3Q15393 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.12□□□□□ -1.75
SF3B3Q15393 RNU7-63P-201ENST00000459054 62 ntBASIC4.12□□□□□ -1.75
SF3B3Q15393 AP001486.1-201ENST00000463339 476 ntBASIC4.12□□□□□ -1.75
SF3B3Q15393 RPL27AP5-201ENST00000469428 449 ntBASIC4.12□□□□□ -1.75
SF3B3Q15393 RPL31P13-201ENST00000484151 370 ntBASIC4.12□□□□□ -1.75
SF3B3Q15393 AC093278.1-201ENST00000494700 600 ntBASIC4.12□□□□□ -1.75
SF3B3Q15393 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.12□□□□□ -1.75
SF3B3Q15393 SNORA70.19-201ENST00000516717 90 ntBASIC4.12□□□□□ -1.75
SF3B3Q15393 SNORD60.2-201ENST00000516883 86 ntBASIC4.12□□□□□ -1.75
SF3B3Q15393 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.12□□□□□ -1.75
SF3B3Q15393 AC013553.2-201ENST00000604244 589 ntBASIC4.12□□□□□ -1.75
SF3B3Q15393 AL162713.1-201ENST00000604480 262 ntBASIC4.12□□□□□ -1.75
SF3B3Q15393 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.12□□□□□ -1.75
SF3B3Q15393 AC112204.3-201ENST00000623822 332 ntBASIC4.12□□□□□ -1.75
SF3B3Q15393 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.12□□□□□ -1.75
SF3B3Q15393 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SF3B3Q15393 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SF3B3Q15393 AC118273.1-201ENST00000525324 3006 ntBASIC4.12□□□□□ -1.75
SF3B3Q15393 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.12□□□□□ -1.75
SF3B3Q15393 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SF3B3Q15393 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.11□□□□□ -1.75
SF3B3Q15393 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
SF3B3Q15393 OR1S2-201ENST00000302592 978 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 RNU5A-8P-201ENST00000364102 114 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 Y_RNA.255-201ENST00000364581 97 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 RNY3P13-201ENST00000365542 102 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 RNU6-606P-201ENST00000384721 111 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 MIR19A-201ENST00000384878 82 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 MIR607-201ENST00000385241 96 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 AL136116.1-201ENST00000403591 381 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 AL591416.1-201ENST00000404015 867 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 EI24P1-201ENST00000416584 867 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.11□□□□□ -1.75
SF3B3Q15393 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.11□□□□□ -1.75
SF3B3Q15393 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.11□□□□□ -1.75
SF3B3Q15393 RPL21P112-201ENST00000434403 463 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 TAAR7P-201ENST00000436141 242 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 DDX3P2-201ENST00000446138 111 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 AC140076.1-201ENST00000449897 361 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 AC006445.1-201ENST00000491925 405 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 RPL7P47-201ENST00000497299 556 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.11□□□□□ -1.75
SF3B3Q15393 COX7A2P2-201ENST00000505291 250 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.11□□□□□ -1.75
SF3B3Q15393 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.11□□□□□ -1.75
SF3B3Q15393 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.11□□□□□ -1.75
SF3B3Q15393 HIGD1AP1-201ENST00000550979 275 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 AC125611.2-201ENST00000551907 647 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SF3B3Q15393 MIR4795-201ENST00000584182 89 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 GLUD1P4-201ENST00000590914 418 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 VN1R80P-201ENST00000597126 338 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 AC007566.2-201ENST00000603642 413 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 AC245517.5-201ENST00000611529 162 ntBASIC4.11□□□□□ -1.75
SF3B3Q15393 AL354950.2-201ENST00000617939 290 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms